'Generation sequencing' presentation slideshows

Overview and Applications of Next-Generation Sequencing Technologies

1.39k views • 54 slides

Next Generation Sequencing Technologies

Next Generation Sequencing Technologies. Rob Mitra Lecture 02/17/09. Forward Genetics. Genotype. Phenotype. Hypothesis. Test Hypothesis By Genetic Manipulation. Forward Genetics. Mutation in APC Gene. Two groups: 1. Develop Colorectal cancer At Young Age 2. Do not. Genotype.

1.21k views • 48 slides

Exome Sequencing Data Analysis

Exome Sequencing Data Analysis. Chunhua Yan, Ph.D. NCI Center for Biomedical Informatics and Information Technology (CBIIT ) 3/18/2015. Sample preparation Genomic DNA. Exome sequencing workflow. Library construction. Sequencing Illumina , Roche, Life Tech. Raw reads FASTQ, QC report.

732 views • 44 slides

Next Generation Sequencing, Assembly, and Alignment Methods

Next Generation Sequencing, Assembly, and Alignment Methods . Andy Nagar. Agenda. Background Next Generation Sequencing Sequence Assembly Sequence Alignment Traditional Alignment Algorithms Next Generation Alignment Algorithms Conclusion. Background.

725 views • 35 slides

Somatic Activity Of Retrotransposons In Human

608 views • 31 slides

outline

Exploring barcode splits among morphologically cryptic species of Lepidoptera through examining alternative loci and next-generation sequencing . Claudia Bertrand, Rodolphe Rougerie , Daniel H. Janzen, Winnie Hallwachs and Mehrdad Hajibabaei. outline. Cryptic species & DNA barcodes Methods

458 views • 28 slides

Scalable Algorithms for Next-Generation Sequencing Data Analysis

Scalable Algorithms for Next-Generation Sequencing Data Analysis. Ion Mandoiu UTC Associate Professor in Engineering Innovation Department of Computer Science & Engineering. Next Generation Sequencing. Illumina HiSeq 2000. Roche/454 FLX Titanium. http://www.economist.com/node/16349358.

960 views • 27 slides

Optimizing pooling strategies for the massive next-generation sequencing of viral samples

Optimizing pooling strategies for the massive next-generation sequencing of viral samples. Pavel Skums 1 Joint work with Olga Glebova 2 , Alex Zelikovsky 2 , Ion Mandoiu 3 and Yury Khudyakov 1. 1 Centers for Disease Control and Prevention, Atlanta, GA

373 views • 25 slides

371 views • 22 slides

Second and third generation sequencing technologies

Second and third generation sequencing technologies. Morten Rasmussen, PhD. Outline. What was before? All the new players 454 Illumina SOLiD Helicos PGM Pacific Biosciences Oxford Nanopores Many more to come. What is first generation sequencing?. Sequencing = read DNA code, A-C-G-T

709 views • 21 slides

GNUMap : Unbiased Probabilistic Mapping of Next-Generation Sequencing Reads

GNUMap : Unbiased Probabilistic Mapping of Next-Generation Sequencing Reads. Nathan Clement Computational Sciences Laboratory Brigham Young University Provo, Utah, USA. Next-Generation Sequencing. Problem Statement .

319 views • 20 slides

Metatranscriptomics: Challenges and Progress

AUG. AUG. AUG. AUG. AUG. AUG. AUG. Metatranscriptomics: Challenges and Progress. Shaomei He DOE Joint Genome Institute. Metatranscriptome The complete collection of transcribed sequences in a microbial community: Protein-coding RNA (mRNA)

1.19k views • 20 slides

Next Generation Sequencing Approach to Desmoid Tumors

Next Generation Sequencing Approach to Desmoid Tumors. Matt van de Rijn. Which questions do we hope to address?. Can we distinguish aggressive desmoids from those that are indolent? Can we distinguish recurrent desmoid tumors from scars?. What do we need to know about biology?.

351 views • 20 slides

The effect of Next - Generation Sequencing technology on complex trait research

The effect of Next - Generation Sequencing technology on complex trait research. Challenge analysis. Presented by December 10, 2013. Ladang Auxane Mombaerts Laurent Uyttendaele Vincent. TABLE OF CONTENTS. Introduction Challenge analysis

289 views • 18 slides

APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab:

239 views • 17 slides

The SOLiD System: Next-Generation Sequencing

459 views • 15 slides

ULTRASEQUENCING . Next Generation Sequencing : methods and applications .

166 views • 11 slides

(%)

123 views • 3 slides

Exploiting Next Generation Sequencing to investigate the genetics of

Exploiting Next Generation Sequencing to investigate the genetics of parsnip root disease and develop a marker assisted breeding strategy Lauren Chappell 1 ( L.H.K.Chappell@Warwick.ac.uk ) Supervisors: Dr Guy Barker 1 , Dr John Clarkson 1 , Dr Graham Teakle 1 & Mrs Sue Kennedy 2

115 views • 1 slides

The BCM Microarray Core Facility: Closing the Next Generation Gap

Isolate mRNA and Fragment. 1-10 m g of Total RNA. T. A. A. T. 1st and 2nd strand cDNA synthesis. Ligate Adapters. Sequencing on GAIIx. Enriched cDNA Library by PCR. Cluster Generation on Flow Cell. Size selection and gel purification.

168 views • 1 slides