'Functional annotation' presentation slideshows

What I will tell

DECONSTRUCTING EVOLUTION TO PERTURB PROTEINS AND NETWORKS Olivier Lichtarge MD, PhD Cullen Professor of Human and Molecular Genetics Baylor College of Medicine Houston, Texas USA. PROLOGUE. What I will tell. What I want to tell. What I tried to tell.

1.45k views • 130 slides

Havana, Cuba, 21.11.2003

Mining the functional genomics data III Data integration: Gene Ontology, PPI, URLMAP Jaak Vilo vilo@egeen.ee. Havana, Cuba, 21.11.2003. Components of Expression Profiler http://ep.ebi.ac.uk/. External data, tools pathways, function, etc. EP:PPI Prot-Prot ia. EP:GO GeneOntology.

972 views • 89 slides

Anastasia Nikolskaya PIR (Protein Information Resource), Georgetown University Medical Center

FUNCTIONAL ANALYSIS OF PROTEIN SEQUENCES: ANNOTATION AND FAMILY CLASSIFICATION. Anastasia Nikolskaya PIR (Protein Information Resource), Georgetown University Medical Center. Problem:. Most new protein sequences come from genome sequencing projects Many have unknown functions

575 views • 46 slides

CACAO Training

618 views • 45 slides

Protein Networks / Protein Complexes

Protein Networks / Protein Complexes. Protein networks could be defined in a number of ways - Co-regulated expression of genes/proteins Proteins participating in the same metabolic pathways Proteins sharing substrates Proteins that are co-localized

590 views • 45 slides

CSCE555 Bioinformatics

CSCE555 Bioinformatics. Lecture 23 Integrative Genomics II Meeting: MW 4:00PM-5:15PM SWGN2A21 Instructor: Dr. Jianjun Hu Course page: http://www.scigen.org/csce555. University of South Carolina Department of Computer Science and Engineering 2008 www.cse.sc.edu.

502 views • 40 slides

594 views • 37 slides

453 views • 37 slides

Genome Annotation

Genome Annotation. Rosana O. Babu. Sequence to Annotation. Input1-Variant Annotation. Input2- Structural Annotation. Structural Annotation was conducted using AUGUSTUS (version 2.5.5), Magnaporthe_grisea as genome model

1.65k views • 37 slides

414 views • 34 slides

421 views • 30 slides

Bioinformatics resources for IITA Crops

Bioinformatics resources for IITA Crops. GO Workshop 3-6 August 2010. IITA Crops. Genome annotation General plant genome resources IITA crops What is needed?. Genomic Annotation.

370 views • 29 slides

Part 12 Genome Analysis

Part 12 Genome Analysis. Outline. Overview Why do comparative genomic analysis? Assumptions/Limitations Genome Analysis and Annotation Standard Procedure General Purposes Databases for Comparative Genomics Organism Specific Databases Genome Analysis Environments

454 views • 28 slides

Ontologies

603 views • 27 slides

Dictionaries and Ontologies in Structural Biology

Dictionaries and Ontologies in Structural Biology. Scope of Ontology PDB Exchange Dictionary. Meta Data Experimental information Molecular description Structural description Coordinates Macromolecule Ligands Solvent. History of Project. 1990 mmCIF project begins

271 views • 18 slides

Network construction and exploration using CORNET and Cytoscape - Excercises

Network construction and exploration using CORNET and Cytoscape - Excercises. SPICY WORKSHOP Wageningen, March 8 th 2012 Stefanie De Bodt. CORNET. https://bioinformatics.psb.ugent.be/cornet Use Firefox Accept certificate Allow popups . Excercise 1a: Pairwise co-expression using CORNET.

301 views • 17 slides

Create and assess protein networks through molecular characteristics of individual proteins

261 views • 15 slides

Functional Annotation of Proteins via the CAFA Challenge

270 views • 13 slides

The problem

The problem. How to integrate the massive amounts of data on Drosophila neurobiology to explore anatomy, formulate hypotheses and find reagents?. Behavior/neural process ontology on FlyBase. Gene ontology annotations of genes neurological system process

238 views • 12 slides

PAMGO outreach

168 views • 6 slides