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Hidden Markov Models

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Hidden Markov Models

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Hidden Markov Models

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CSE 5290: Algorithms for Bioinformatics Fall 2011

CSE 5290: Algorithms for Bioinformatics Fall 2011. Suprakash D at ta datta@cse.yorku.ca Office: CSEB 3043 Phone: 416-736-2100 ext 77875 Course page: http://www.cse.yorku.ca/course/5290. Next. Markov chains and hidden Markov models

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Hidden Markov Model

Hidden Markov Model. CG -Islands. Given 4 nucleotides: probability of occurrence is ~ 1/4. Thus, probability of occurrence of a dinucleotide is ~ 1/16. However, the frequencies of dinucleotides in DNA sequences vary widely. In particular, CG is typically underrepresented

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CSE 5290: Algorithms for Bioinformatics Fall 2009

CSE 5290: Algorithms for Bioinformatics Fall 2009. Suprakash D at ta datta@cs.yorku.ca Office: CSEB 3043 Phone: 416-736-2100 ext 77875 Course page: http://www.cs.yorku.ca/course/5290. Next. Markov chains and hidden Markov models

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Hidden Markov Models Chapter 11

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Hidden Markov Models Chapter 11

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