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Informatics tools for next-generation sequence analysis

Informatics tools for next-generation sequence analysis. Gabor Marth Boston College Biology Next-Generation Sequencing MiniSymposium CHOP Philadelphia, PA April 6, 2009. New sequencing technologies…. … offer vast throughput. 100 Gb. Illumina/Solexa , AB/ SOLiD sequencers.

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798 views • 60 slides

Canadian Bioinformatics Workshops

Canadian Bioinformatics Workshops. www.bioinformatics.ca. Next Generation Sequencing: Mapping &amp; Assembly. Michael Brudno Department of Computer Science Banting &amp; Best Dept of Medical Research University of Toronto 14/05/2008. Questions to Ask. What do you want to learn?

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490 views • 47 slides

SHRiMP: The SHort Read Mapping Package

SHRiMP: The SHort Read Mapping Package. Michael Brudno Department of Computer Science University of Toronto 11/09/08. Handling NGS Data. NGS: at least 3 distinct read types: Illumina/Solexa, 454  letter-space AB SOLiD  color-space (di-base sequencing) 2-pass SMS (Helicos)

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353 views • 23 slides

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