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Using workspaces on nanoHUB.org. Michael McLennan Software Architect Network for Computational Nanotechnology. Violin. File server. What is a workspace?. Full-featured Linux desktop For tool developers For researchers Accessible from any web browser

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using workspaces on nanohub org

Using workspaces on nanoHUB.org

Michael McLennanSoftware ArchitectNetwork for Computational Nanotechnology

what is a workspace

Violin

File server

What is a workspace?
  • Full-featured Linux desktop
  • For tool developers
  • For researchers
  • Accessible from any web browser
  • Still running after you close your browser
  • Access to Grid resources
  • File storage provided by nanoHUB
requesting workspace access
Requesting workspace access
  • Given automatically to tool developers
requesting workspace access1
Requesting workspace access
  • Given to others on a case-by-case basis
  • Give us a good reason:
  • How are you affiliated with NCN?
  • What are you doing?
launching workspaces

“my tools” list on

“my nanoHUB” page

Launching workspaces

http://www.nanohub.org/tools/workspace

accessing running workspaces

Close the browser

Still running, and listed under “my sessions”

Accessing running workspaces
resize the screen

Click and drag

Type in a new size

Press Tab

Resize the screen
pop out as a separate window
Pop out as a separate window

Get rid of this header and

see more of the workspace

Solve problem of mouse trails

e.g., MacOSX/Firefox

pop out as a separate window1
Pop out as a separate window

Click Popout again to pop back in

This area goes blank.

Closing this window also closes the popup.

share your screen

See same

screen at

same time

Check this if you don’t

want to share control

Enter the login

for your friend

Share your screen

myfriend

developing tools
Developing tools
  • See instructions:
  • in your project area at wiki/GettingStarted
  • Subversion tutorial
  • Rappture tutorial
  • Use Subversion to check out project source code
  • svn checkout https://repo.nanohub.org/svn/app-qdot/trunk app-qdot
  • Edit, compile, test
  • cd src
  • make install
  • cd ../rappture
  • vi tool.xml
  • rappture
downloading files
Downloading Files
  • Easy way to download files:
  • exportfile tool.xml
  • exportfile examples/*
uploading files
Uploading files
  • Easy way to upload files:
  • importfile src.tgz
uploading files1
Uploading files
  • Easy way to upload files:
  • importfile src.tgz
  • importfile mesh.dat doping.dat
using webdav to access files
Using webdav to access files

Browse your nanoHUB files on any Windows, Macintosh, or Linux desktop

  • On Microsoft Windows:
  • Go to My Network Places
  • Click Add a network place
  • Internet or network address:https://webdav.nanohub.org
using webdav to access files1

Next time, use this shortcut

file

Log in with your nanoHUB

username and password

Using webdav to access files

Browse your nanoHUB files on any Windows, Macintosh, or Linux desktop

See this page on nanoHUB

for instructions on other

platforms

Drag files

in and out

using sftp to access files

your nanoHUB login

Using sftp to access files

sftp mmclennan@sftp.nanohub.org

sftp mmc@mmc.rcac.purdue.edu

accessing the grid

Violin

Accessing the grid

spice3

Launch jobs on the grid

If you would have typed…

spice3 –b indeck > out.dat

…then submit the job to the grid as:

submit spice3 –b indeck > out.dat

submit --venue hamlet spice3 –b indeck > out.dat

more information
More Information
  • Pick an editor:
  • vi
  • emacs
  • nano
  • xedit

Linux tutorial online:

http://www.ee.surrey.ac.uk/Teaching/Unix/