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Correlation of TF-Responsiveness on Tissue-Specificity in Gene Expression

This study examines the correlation of TF-responsiveness on tissue-specificity in gene expression. Analysis was conducted using subsets of TFs - stem cell-specific, tissue-specific, and widely expressed. The association with tissue specificity was measured based on gene expression information from the NIA database.

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Correlation of TF-Responsiveness on Tissue-Specificity in Gene Expression

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  1. 0.3 0.3 A B -0.2 -0.2 1.4 1.6 1.4 1.2 Log10(Bi) estimated from tissue-specific TFs Log10(Bi) estimated from widely expressed TFs -0.7 -0.7 1.2 1 1 0.8 -1.2 -1.2 0.8 0.6 r = 0.729, t = 145.1, p<0.001 r = 0.768, t = 163.2, p<0.001 0.6 -1.7 -1.7 0.4 -1.7 -1.2 -0.7 -0.2 0.3 -1.7 -1.2 -0.7 -0.2 0.3 0.4 log10(Bi) estimated from stem-cell specific TFs log10(Bi) estimated from tissue-cell specific TFs 0.2 0.2 0.3 D 0 0 C 0 0.2 0.4 0.6 0.8 1 0 0.2 0.4 0.6 0.8 1 1.2 -0.2 Log10(Bi) estimated from widely expressed TFs -0.7 Information, bits 1.6 -1.2 1.4 r = 0.723, t = 142.5, p<0.001 1.2 -1.7 -1.7 -1.2 -0.7 -0.2 0.3 1 log10(Bi) estimated from stem-cell specific TFs TF-responsiveness (Bi) estimated from stem-cell specific TFs 0.8 0.6 E F 0.4 0.2 Information, bits 0 Information, bits 0 0.2 0.4 0.6 0.8 TF-responsiveness (Bi) estimated from tissue-cell specific TFs TF-responsiveness (Bi) estimated from widely expressed specific TFs Additional File 10.Correlation of TF-responsiveness (Bi) estimated using three subsets of TFs (stem cell-specific, tissue-specific, and widely expressed) (A-C) and their association with tissue-specificity, measured by information on the basis of gene expression in differentiated cells and tissues from NIA database (D-F). Each dot represents the average for 100 genes with similar TF-responsiveness.

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