introduction to medicinal chemistry l.
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Introduction to Medicinal Chemistry. Chapter 1. What is medicinal chemistry?. The science that deals with the discovery or design of new therapeutic chemicals and the development of these chemicals into useful medicine. What is “medicine”?. Drugs, pharmaceutics

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what is medicinal chemistry
What is medicinal chemistry?
  • The science that deals with the discovery or design of new therapeutic chemicals and the development of these chemicals into useful medicine
what is medicine
What is “medicine”?
  • Drugs, pharmaceutics
    • Media distinction between drugs that are used in medicine and drugs that are abused (addiction).
  • A compound that interacts with a biological system, and produces a biological response (ideally desired and positive)
good vs bad drugs
“Good” vs. “Bad” Drugs
  • No medicine has only benefits or drawbacks
  • A “good” medicine would have to satisfy the following criteria.: it would have to do what it is meant to do and have no toxic or unwanted side effects and be easy to take.
  • Morphine
    • In low dose it is an Excellent analgesic, but have serious side effects such as:
    • Addiction, tolerance (the effect of the drug diminishes after repeated doses and so we need to increase the size of the dose to achieve the same results.)
    • Respiratory depression and it may kill if taken in excess.
barbiturates series of synthetic compounds with sedative properties
Barbiturates ( series of synthetic compounds with sedative properties)
  • Depressants, sedatives, anesthetics
  • General anesthetics in Surgery
  • They are known to cross blood brain barrier because they are fat soluble
  • Overdoses fatal (Pearl Harbor, wounded persons were given these drugs before surgery but many of them died)
  • Diamorphine
  • One of the best painkillers (“hero”=heroic drug)
  • 1898: on market, but
  • 1903: withdrawn from market due to discovery of its addictive properties.
  • 2006: still used under strict control as the drug of choice for treating patients dying of cancer. It reduces pain as well as it produces a euphoric effect to treat depression in patients close to death
everyday drugs
Everyday drugs
  • Still produce a biological response
  • Caffeine (stimulant), in coffee, tea cocoa(when you take a cup of coffee you are a drug user but when you crave a cup of coffee then you are a drug addict)
  • Sugar reacts with the taste buds of the tongue to produce a sense of sweetness taste
  • Nicotine (sedation or calming effect), in cigarettes
  • Alcohol is an unsatisfactory drug because it is difficult to judge the correct dose required to gain the happiness effect without drifting into the higher dose levels that produce un wanted side effects such as staggering effect. Also, either happiness or depression may result)
  • Food additives may cause allergies
  • Junk food and fizzy drinks cause hyperactivity in children (contain chemicals that are converted in the body into neurotransmitters leading to excess messages are transmitted in the brain leading to disruptive (unsettling, troublesome) behavior.
  • Vitamins
  • Herbs
    • Basil: 50 potential carcinogens
    • Cultural aspects
good vs bad drugs8
“Good” vs. “Bad” Drugs
  • Safety of a drug depends on its :
    • Dosage level
      • Almost anything in excess will be toxic but in proper dose it is a good medicine
    • Chronic exposure
  • Measure of safety of drug = therapeutic index.
therapeutic index
Therapeutic index
  • Measure of a drug’s beneficial effects at low dose vs. harmful effects at high dose
  • Comparison of dose levels which lead to toxic effects to dose levels which lead to maximum therapeutic effects
  • High therapeutic index = large margin of safety
    • Marijuana = 1000
    • Alcohol = 10
    • Does not take chronic use into account
medicinal chemistry
Medicinal Chemistry
  • Under what conditions are drugs “good,” and what to they do to the body?
  • Curare (Tubocurarine structure)

It was used as a deadly poison which was used by the native people of South America to tip their arrows such that a minor arrow wound would be fatal.

Drugs based on the tubocurarine

structure are used in surgical

operations to relax muscles.

classification of drugs
Classification of drugs
  • Four main groups (overlap)

1. By biological/pharmacological effect

      • Analgesics, anti-asthmatics, antipsychotics, antihypertensives, antihistaminic, antibiotics ,etc.
      • Large and varied assortment of drugs
      • Many mechanisms of action
      • Some drugs may have more than just one use.

2. By chemical structure

      • Penicillins, opiates, barbiturates
      • Common skeleton
      • Pharmacological effects may be similar or different uses in medicine
classification of drugs12
Classification of drugs

3.By target system

      • Examples: Antihistamines
      • Affect a certain target system in the body
      • Variety of structures due to large number of stages in system (synthesis, release, receptor interaction and removal of histamine for example)
      • Not all antihistamines are similar compounds
  • By target site of action (more specific)
      • Anticholinesterases (inhibit acetylcholinesterase enzyme in CNS)
      • Target enzyme or receptor with which they interact.
      • Usually common mechanism
history of medicinal chemistry
History of Medicinal Chemistry
  • Studied/practiced for thousands of years
  • Medicine men/witch doctors
    • Roots, plants, trees, berries, herbs (medical folklore)
    • Often placebos (useless drugs but they worked because the patients had a will of them to work )
  • Last 150 years: isolation and purification of active principles of the remedies so Mechanism of reaction/response
  • 1909: first chemotherapy means chemicals that directly interfere with the proliferation of the microorganisms at concentrations tolerated by the host-selective toxicity. by Ehrlich)
    • Salvarsan (compound “606” arsenic containing compound) for syphilis
    • Later replaced with penicillin (toxic fungal metabolite,1940s)
    • 2005: Structure determination
  • 400 BC: Hippocrates
    • Chew bark of willow tree for pain (child birth and eye infections)
  • Active component of willow bark = salicin
  • Aspirin itself has an antiinflammatory action
  • It is a prodrug to mask the side effect (gastric bleeding) due to free phenolic group in salicylic acid, where the ester group is later hydrolyzed in the body into free active drug.
cocaine i
Cocaine (I)
  • Active principle in South American coca bush
    • Plant used as a stimulant, it is absorbed sublingually by chewing coca leaves
    • mystical/religious reasons
  • Isolated 1880’s
    • It is the lead compound for Local Anesthetic in dentistry
  • Addiction (absorbed by mucous membrane of the nose when its powder snorted or sniffed or smoked) : Freud
    • Used for depression; in other drug addiction
  • Drug development based on structure (by simplification of structure)
    • Procaine II (Novocain)