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Prepare for your exam on UNIX commands, file management, Perl programming, data types, sequence alignment, and homology search. Learn about motivation, scoring methods, and high-level tools. Exam next Thursday.
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CS 451 / 558 Week 5, Thu
Exam next Thursday Topics covered • Basic commands in unix • Navigation, file management, input/output • Programming concepts in Perl • Data types, conditionals, loops, regex • Sequence comparison/alignment • Motivation, dot plots, dynamic programming, scoring (matrices/gaps) • Homology search • Motivation, high-level methods, resources/tools, E-values