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Recognition, Tracking, and Data Acquisition for Microscopic Worms

Recognition, Tracking, and Data Acquisition for Microscopic Worms. ECPE 491: Senior Design Professor Mani Mina. Group 03: Worm Tracking. Client: Dr. Santosh Pandey , Microfluidics Lab Graduate Supervisor: Roy Lycke Ryan Alley, Team Leader Colin Ray, Communicator

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Recognition, Tracking, and Data Acquisition for Microscopic Worms

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  1. Recognition, Tracking, and Data Acquisition for Microscopic Worms ECPE 491: Senior Design Professor Mani Mina

  2. Group 03: Worm Tracking • Client: Dr. SantoshPandey, Microfluidics Lab • Graduate Supervisor: Roy Lycke • Ryan Alley, Team Leader • Colin Ray, Communicator • Laith Abbas, Webmaster • Shan Zhong • ShushengXu

  3. Problem Statement Group 03: Worm Tracking • Background • C. elegans • What are C. elegans? • Why are C. elegans studied? • How are C. elegansuseful? • Behavior • Why track them? • Qualitative vs. quantitative data • How to gather quantitative data?

  4. Functional Requirements Group 03: Worm Tracking • Video Support • The software shall support the following video compression codecs: • Microsoft Video 1 • Intel Indeo • The software shall support input video frame rates between 1 and 30 frame-per-second.

  5. Functional Requirements Group 03: Worm Tracking • (take from doc)

  6. Non-Functional Requirements Group 03: Worm Tracking • (take from doc)

  7. Other Considerations Group 03: Worm Tracking • Lab environment • Video Quality (resolution, magnification, frames-per-second, length) • Host machine expectations (deployment platforms) • Pre-recorded vs. realtime • Number of worms per unit volume (1 cm x 1 cm x 100 microns)

  8. Market Survey Group 03: Worm Tracking • Use past work stuff here • Talk about uniqueness (behavior analysis) cost-effectiveness

  9. Potential Risks & Mitigation Group 03: Worm Tracking • ???

  10. Resource/Cost Estimate Group 03: Worm Tracking • Open source crap is free, etc…

  11. Project Milestones & Schedule Group 03: Worm Tracking • Take a look at wiki and talk about that here • (graph of critical path schedule/timeline … )

  12. System Design Group 03: Worm Tracking • Ryan architects tentative thing (prototype design)

  13. Detailed Design Group 03: Worm Tracking • Details

  14. Test Plan Group 03: Worm Tracking • Play a video!!!! • Metrics (human comparison, quality of videos, etc…)

  15. Prototype Group 03: Worm Tracking • Description and applicable results • (videos? Screenshots?)

  16. Project Status Group 03: Worm Tracking • (reference milestones)

  17. Individual Contributions Group 03: Worm Tracking • (for each person)

  18. Future Plan Group 03: Worm Tracking

  19. References Group 03: Worm Tracking • …

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