Adding GO for Large Datasets. COST Functional Modeling Workshop 22-24 April, Helsinki. Large Datasets. RNASeq data sets and etc.: large data sets often there is little functional information available m any enrichment analysis tools will not accept large gene lists
COST Functional Modeling Workshop
22-24 April, Helsinki
EMBOSS Transeq (or etc)
list of motifs and domains
species’ taxon ID
GO association file (IEA, ND)
BLAST database of EXP GO annotations for related species
GO association file (ISA)
combine to make single GO annotation file
Note: AgBase & iPlant are working to make these tools freely available via the AgBase & iPlant websites.
Note: GO IEA annotations are continually updated (by manual review) and are considered out of date after one year.