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Networked Delivery of Visible Human Datasets

Networked Delivery of Visible Human Datasets. Art Wetzel Pittsburgh Supercomputing Center Brian Athey University of Michigan Members of the University of Michigan NGI VH Project. University of Colorado Health Sciences. University of Michigan. Pittsburgh Supercomputing Center (PSC).

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Networked Delivery of Visible Human Datasets

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  1. Networked Delivery of Visible Human Datasets Art Wetzel Pittsburgh Supercomputing Center Brian Athey University of Michigan Members of the University of Michigan NGI VH Project PSC’s Biomedical Initiative - An NIH Resource Center

  2. University of Colorado Health Sciences University of Michigan Pittsburgh Supercomputing Center (PSC) Stanford University National Library of Medicine (NLM) Uniformed Service University of the Health Sciences (USUHS) Prototype NGI/I-2 Visible Human Collaboratory For Medical Education and Training Abilene Network PSC’s Biomedical Initiative - An NIH Resource Center

  3. Organization Chart for UofM NGI VH Project PSC’s Biomedical Initiative - An NIH Resource Center

  4. Development Focus: Visible Human Project(courtesy Don Jenkins, NLM) Clinical Patterns Signs & Symptoms Pathophysiology Natural Biologic Variation VISIBLE HUMAN DATASETS Disease and Pathology Normal Variation Teaching Applications Public Domain Web Sites Biological Structure Continuum Structural Change Scale & Resolution Development Aging Embryology Gross Anatomy Micro Anatomy Sub Microscopic Physiology Biochemistry ANCILLARY DATA SETS MRI, CT, PET Radiology Anatomic National Anatomy Archive VIRTUAL HUMAN SIMULATION PSC’s Biomedical Initiative - An NIH Resource Center

  5. VH “Segmentation” PSC’s Biomedical Initiative - An NIH Resource Center

  6. VH Slice Image Capture PSC’s Biomedical Initiative - An NIH Resource Center

  7. Primary Image Data Types of the Visible Human PSC’s Biomedical Initiative - An NIH Resource Center

  8. Coronal Full View PSC’s Biomedical Initiative - An NIH Resource Center

  9. PSC’s Biomedical Initiative - An NIH Resource Center

  10. The University of Michigan Visible Human Project UM VHF Java Browsers (Head and Neck) www.dmsv.med.umich.edu PSC’s Biomedical Initiative - An NIH Resource Center

  11. UMLS Semantic Network PSC’s Biomedical Initiative - An NIH Resource Center

  12. Hand Labeling of the Male Head PSC’s Biomedical Initiative - An NIH Resource Center

  13. Assisted Segmentation PSC’s Biomedical Initiative - An NIH Resource Center

  14. Edge Extension in Z Axis PSC’s Biomedical Initiative - An NIH Resource Center

  15. Surface Renderings PSC’s Biomedical Initiative - An NIH Resource Center

  16. Transparent Surface Rendering Courtesy of NASA Ames PSC’s Biomedical Initiative - An NIH Resource Center

  17. Off Axis Data Views PSC’s Biomedical Initiative - An NIH Resource Center

  18. Non Axis Aligned Features PSC’s Biomedical Initiative - An NIH Resource Center

  19. Image Warping and Morphometrics PSC’s Biomedical Initiative - An NIH Resource Center

  20. GSS Navigation Strategies The General, Static, Structural (GSS) Navigation Engine will Incorporate Eight Landmark Navigation Tools: Articulate Disarticulate Traverse Point Traverse Line Traverse Surface Traverse Surface Representation Toggle What-is? PSC’s Biomedical Initiative - An NIH Resource Center

  21. PSC’s Biomedical Initiative - An NIH Resource Center

  22. Volumetric Views PSC’s Biomedical Initiative - An NIH Resource Center

  23. Lung donor Living donor Open Play button Manual control bar Rewind button Sound button Lung Donor 1. Incision 2. Expose great vessels 3. Cannulate the aorta 4. Cannulate pulmonary artery 5. Clamp and In situ perfusion 6. Removal of lung bloc 7. Lungs split on back table Lung recipient Steps are highlighted as animation and video play side by side. The Virtual Surgical Atlas Courtesy Dr. Bob Marion PSC’s Biomedical Initiative - An NIH Resource Center

  24. Need Timely Access to Data PSC’s Biomedical Initiative - An NIH Resource Center

  25. Create Anatomically Realistic Finite Element Voxel-Based Models from Visible Human Data to Simulate Function • Input physically realistic tissue models for bone, muscle and tendon to simulate motion by having muscle actively contract and move bones • Prototype these muscle bone models for two initial applications • a) Mandibular motion to simulate chewing • b) Breathing with diaphragm muscles • Package resulting simulation data so that it may be served over the net for navigation using Edgewarp software Modeling and Simulation Goals for UM NGI VH Project PSC’s Biomedical Initiative - An NIH Resource Center

  26. Virtual Surgical Simulation Computer-Assisted Surgery Intraoperative Image Guidance Images Ó Surgical Navigation Technologies Courtesy Dr. Bob Marion PSC’s Biomedical Initiative - An NIH Resource Center

  27. Need Performance to Match the Task PSC’s Biomedical Initiative - An NIH Resource Center

  28. For additional Information ... Art Wetzel awetzel@psc.edu Brian Athey bleu@umich.edu http://vhserv.psc.edu:8000 PSC’s Biomedical Initiative - An NIH Resource Center

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