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C-C Bond formation

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C-C Bond formation. Chapter 26. Carbon–Carbon Bond Forming Reactions. To form the carbon skeletons of complex molecules, organic chemists need an extensive repertoire of carbon –carbon bond forming reactions.

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slide2
Carbon–Carbon Bond Forming Reactions
  • To form the carbon skeletons of complex molecules, organic chemists need an extensive repertoire of carbon–carbon bond forming reactions.
  • We have earlier looked at reactions of organometallic reagents such as Grignard, organolithium and organocuprate reagents with carbonyl and other substrates to form larger molecules.
  • The focus of this chapter will be on additional carbon–carbon bond forming reactions which utilize a variety of starting materials and conceptually different reactions.
  • Three such reactions involve coupling of an organic halide with an organometallic reagent or alkene: (1) Organocuprate coupling reactions, (2) Suzuki reaction, and (3) Heck reaction.
slide9
Troublesome side reactions:

Alkylation with alkylbromides from organolithium preparation

Elimination reactions with alkylbromides from organolithium preparation or intended alkyl halide

slide13
Coupling Reactions of Organocuprates
  • Organocuprate reagents react with a variety of functional groups including acid chlorides, epoxides and ,-unsaturated carbonyl compounds.
  • Organocuprate reagents also react with organic halides R′–X to form coupling products R–R′ that contain a new C–C bond.
  • Only one R group of the organocuprate is transferred to form the product, while the other becomes part of the RCu, a reaction product.
slide14
General Features of Organocuprate Coupling Reactions
  • Methyl, 1°, cyclic 2°, vinyl, and aryl halides can be used.
  • Reactions with vinyl halides are stereospecific.
  • The halogen (X) may be Cl, Br, or I.
  • Tertiary (3°) halides are too sterically hindered to react.
slide16
Coupling to Form Hydrocarbons
  • Since organocuprate reagents are prepared in two steps from alkyl halides (RX), this method ultimately converts two organic halides (RX and R′X) into a hydrocarbon R–R′ with a new carbon–carbon bond.
  • This means that using this methodology, a given hydrocarbon can often be made by two different routes.
slide17
Retro Synthetic analysis (Cuprates)

“….the grand thing is to be able to reason backwards. That is a very useful accomplishment, and a very easy one, but people do not practice it much.”

Sherlock Holmes in “A Study in Scarlet”

Break into equal size fragments at branch points or appropriately adjacent to functionality

slide19
Organopalladium Mediated Reactions

Suzuki Reaction

Heck Reaction

slide20
Organopalladium Compounds
  • During a reaction, Pd is coordinated to a variety of groups called ligands, which donate electron density to (or sometimes withdraw electron density from) the metal.
  • A common electron donating ligand is phosphine, some derivatives of which are shown:
slide21
Organopalladium Compounds
  • Organopalladium compounds are generally prepared in situ during the course of a reaction, from another palladium reagent such as Pd(OAc)2 or Pd(PPh3)4.
    • “Ac” is the abbreviation for the acetyl group, CH3C=O, so OAc is the abbreviation for CH3CO2−.
  • In most useful reactions, only a catalytic amount of Pd reagent is used.
  • Two common processes, called oxidative addition and reductive elimination, dominate many reactions of palladium compounds.
slide23
Details of the Suzuki Reaction
  • The Suzuki reaction is a palladium-catalyzed coupling of an organic halide (R′X) with an organoborane (RBY2) to form a product (R–R′) with a new C–C bond.
  • Pd(PPh3)4 is the typical palladium catalyst.
  • The reaction is carried out in the presence of a base such as NaOH or NaOCH2CH3.
  • Vinyl or aryl halides are most often used, and the halogen is usually Br or I.
  • The Suzuki reaction is completely stereospecific.
slide25
Organoboranes in Suzuki Reaction
  • Two types of organoboranes can be used in the Suzuki reaction: vinylboranes and arylboranes.
  • Vinylboranes, which have a boron atom bonded to a carbon–carbon double bond, are prepared by hydroboration using catecholborane, a commercially available reagent.
    • Hydroboration adds H and B in a syn fashion to form a trans vinylborane.
    • With terminal alkynes, hydroboration always places the boron atom on the less substituted terminal carbon.
slide26
Preparation of Arylboranes
  • Arylboranes, which have a boron atom bonded to a benzene ring, are prepared from organolithium reagents by reaction with trimethyl borate [B(OCH3)3].
slide28
Synthesis Using the Suzuki Reaction
  • The Suzuki reaction was a key step in the synthesis of bombykol, the sex pheromone of the female silkworm moth.
  • The synthesis of humulene illustrates that an intramolecular Suzuki reaction can form a ring.

Figure 26.2

slide29
Retrosynthetic Analysis of Suzuki Reaction

Aryl-Aryl links

Aryl-Alkenyl links

Alkenyl-Alkenyl links

slide30
Synthesis using Suzuki Coupling reaction in Loy Lab

New monomers for making flame resistant polymers

slide31
The Heck Reaction
  • The Heck reaction is a Pd-catalyzed coupling of a vinyl or aryl halide with an alkene to form a more highly substituted alkene with a new C–C bond.
  • One H atom of the alkene starting material is replaced by the R’ group of the vinyl or aryl halide.
  • Palladium(II) acetate [Pd(OAc)2] in the presence of a triarylphosphine [P(o-tolyl)3] is the typical catalyst.
  • The reaction is carried out in the presence of a base such as triethylamine.
slide32
The Heck Reaction
  • The alkene component is typically ethylene or a monosubstituted alkene (CH2=CHZ).
  • The halogen is typically Br or I.
  • When Z=Ph, COOR or CN in a monosubstituted alkene, the new C–C bond is formed on the less substituted carbon to afford a trans alkene.
  • When a vinyl halide is used as the organic halide, the reaction is stereospecific.
slide34
Using the Heck Reaction in Synthesis
  • To use the Heck reaction in synthesis, you must determine what alkene and what organic halide are needed to prepare a given compound.
  • To work backwards, locate the double bond with the aryl, COOR, or CN substituent, and break the molecule into two components at the end of the C=C not bonded to one of these substituents.
slide36
Retrosynthetic Analysis of Heck Reaction

Advantage over Suzuki Coupling: fewer steps (No boranic ester is needed)

slide37
Heck Reaction in Loy Lab

Dye for making fluorescent nanoparticles

slide38
Carbenes
  • A carbene, R2C:, is a neutral reactive intermediate that contains a divalent carbon surrounded by six electrons—the lone pair, and two each from the two R groups.
  • These three groups make the carbene carbon sp2 hybridized, with a vacant p orbital extending above and below the plane containing the C and the two R groups.
  • The lone pair occupies an sp2 hybrid orbital.

Singlet carbene

slide39
Dihalocarbenes
  • Dihalocarbenes, :CX2, are especially useful reactive intermediates since they are readily prepared from trihalomethanes (CHX3) by reaction with strong base.
  • For example, treatment of chloroform (CHCl3) with KOC(CH3)3 forms dichlorocarbene, :CCl2.
  • Dichlorocarbene is formed by a two-step process that results in the elimination of the elements of H and Cl from the same carbon.
  • Loss of the two elements from the same carbon is called  elimination.
slide41
Dihalocarbenes in Cyclopropane Synthesis
  • Since dihalocarbenes are electrophiles, they readily react with double bonds to afford cyclopropanes, forming two new carbon–carbon bonds.
slide42
Carbene Addition to Alkenes
  • Cyclopropanation is a concerted reaction, so both bonds are formed in a single step.
  • Carbene addition occurs in a syn fashion from either side of the planer double bond.
  • Carbene addition is a stereospecific reaction, since cis and trans alkenes yield different stereoisomers as products.
slide43
Methylene, The Simplest Carbene
  • Methylene, :CH2, is readily prepared by heating diazomethane, which decomposes and loses nitrogen.
  • The reaction of methylene produced in this manner with an alkene often leads to a complex mixture of products.
  • Thus the reaction cannot be reliably used for cylcopropane synthesis.

43

slide44
Polymerization of carbenes:

Thermal of Lewis acid catalyzed

Noble metal catalyzed

slide46
The Simmons–Smith Reaction
  • Nonhalogenated cyclopropanes can be prepared by the reaction of an alkene with diiodomethane, CH2I2, in the presence of a copper-activated zinc reagent called zinc–copper couple [Zn(Cu)].
  • This is known as the Simmons–Smith reaction.
  • The reaction is stereospecific.
slide48
Alkene Metathesis
  • Alkene (olefin) metathesis is a reaction between two alkene molecules that results in the interchange of the carbons of their double bonds.
  • Two  and two  bonds are broken and two new  and two new  bonds are formed.
slide49
Catalysts for Metathesis
  • Olefin metathesis occurs in the presence of a complex transition metal catalyst that contains a carbon–metal double bond.
  • The metal is typically ruthenium (Ru), tungsten (W), or molybdenum (Mo).
  • In a widely used catalyst called Grubbs catalyst, the metal is Ru.
  • Metathesis catalysts are compatible with the presence of many functional groups (such as OH, OR, and C=O).
slide50
Usefulness of Metathesis Reactions
  • Because olefin metathesis is an equilibrium process and with many alkene substrates yields a mixture of starting material and two or more alkene products, it is useless for preparative processes.
  • However, with terminal alkenes, one metathesis product is ethylene gas (CH2=CH2), which escapes from the reaction mixture and drives the equilibrium to the right.
  • Thus, monosubstituted alkenes (RCH=CH2) and 2,2-disubstituted alkenes (R2C=CH2) are excellent metathesis substrates because high yields of a single alkene product are obtained.
slide54
Retrosynthetic Analysis of Metathesis Reaction

Are precursors available?

Will cross reaction ( R ≠ R’) be dominant

slide55
?

?

slide57
Ring Closing Metathesis (RCM)
  • When a diene is used as a starting material, ring closure occurs.
  • These reactions are typically run in very dilute solution so that the reactive ends of the same molecule have a higher probability of finding each other.
  • High dilution favors intramolecular rather than intermolecular metathesis.
slide58
Ring Closing Metathesis (RCM) in Synthesis
  • Epothilone A is a promising anticancer agent that was first isolated from soil bacteria from the banks of the Zambezi River in South Africa.
  • Sch38516 is an antiviral agent active against influenza A.
slide60
Ring Opening Metathesis Polymerization

Of benzvalene

Benzvalene is a less stable isomer of benzene

ΔH = -282 kJ/mole

slide61
General synthesis strategies
  • Build carbon framework with enolate reactions and other C-C bond building reactions (Suzuki, Heck, Metathesis, Cuprates, Diels-Alder, & more.)
  • Use functionalities to activate C-C bond building chemistry
  • Functional group conversions to provide desired organic substituents
slide62
Directions in Synthesis
  • Regio- and stereochemical specificity
  • More atom efficiency (less waste).
  • Reactions using aqueous or non-toxic solvents (H2O, alcohols)
  • Reactions using less hazardous starting materials
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