Linear Scaling Quantum Chemistry
140 likes | 215 Views
Explore the scalability of quantum chemistry through innovative linear scaling methodologies for faster computations. Learn about the current status and potential advancements in computational efficiency.
Linear Scaling Quantum Chemistry
E N D
Presentation Transcript
Linear Scaling Quantum Chemistry Richard P. Muller1, Bob Ward2, and William A. Goddard, III1 1Materials and Process Simulation Center California Institute of Technology and 2 Department of Computer Science University of Tennessee, Knoxville
Guess r Form H Diagonalize r Did r Change? Yes No Done Why QM Calculations Take So Long O(N4) PS/Jaguar O(N2) O(N3) Difficult to reduce: Krylof space, Conjugate gradient Currently only important if N > 2000
Psuedospectral Technology (with Columbia U.) • Multigrids • Dealiasing functions • Replace N4 4-center Integrals with N3 potentials • Use Potentials to Form Euler-Lagrange Operator: • CURRENT STATUS: • Single processor speed 9 times faster than best alternate methodology • Scales a factor of N2 better than best alternate methodology QM Methodology (Jaguar) Gaussian Log CPU Time Jaguar Log (number basis functions) Collaboration with Columbia U. and Schrödinger Inc.
QM Scalability: Comments • Algorithm ill-suited to massive parallelizability • Seriel diagonalization • Local data • Two steps in Quantum Chemistry • Hamiltonian H formation • H diagonalization to produce density r • Because H is a function of r, this is a nonlinear problem • Linearization and parallelization in Quantum Chemistry requires techniques to localize the density. • Modified Divide-and-Conquer technique • Solves the H-formation and H-diagonalization problems • Generalize to metallic systems
nbf Divide and Conquer H Hamiltonian: Divided into fragments and buffer zones
Divide and Conquer Shortcomings • GOOD: • Solves H-formation, H-diagonalization, and parallelization simultaneously! • BAD if: Correlation lengths > fragment size! • Metals, surfaces, conjugated systems • Must hierarchically correct error in fragments • Pairwise recombination of fragments to yield larger fragments • Hierarchically combine larger fragments to yield still-larger fragments • Continue until converged • At each level, include additional H elements: • Few, since fall off as 1/r3 (dipole potential)
Testing Divide and Conquer • Linear Alkanes • 14-98 atoms • 170-817 basis functions • Use standard Jaguar B3LYP/6-31G** techniques • Simple integration for testing
Beyond Simple Divide and Conquer • Buffer zones • Only way to correct for errors in D&C • Require large buffer zones (7x size of fragment); we only use small ones here. • Impractical for large systems/long correlation lengths -- ultimately start scaling as N3 • Renormalization-type approach • Combine pairs of lowest level of blocks to make larger blocks • …pairs of larger blocks to make still larger blocks • …etc. Continue until converged
Divide, Conquer, and Recombine A B • Eigenvalue Solving Going Up • Already have eigs of HA and HB. • Make good guess at eigs of H(A+B) • Can use fast (linear) diagonalization: • Krylov-space • Conjugate gradient • Don’t have to do O(N3) diagonalization