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Chapter 6 Gene Prediction: Finding Genes in the Human Genome

Chapter 6 Gene Prediction: Finding Genes in the Human Genome. Figure 6.1: Map of the human X-chromosome. Figure 6.2: Schematic view of a typical prokaryotic gene and the mRNA transcribed from the gene.

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Chapter 6 Gene Prediction: Finding Genes in the Human Genome

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  1. Chapter 6 Gene Prediction: Finding Genes in the Human Genome

  2. Figure 6.1: Map of the human X-chromosome

  3. Figure 6.2: Schematic view of a typical prokaryotic gene and the mRNA transcribed from the gene

  4. Figure 6.3: Transcriptional units in prokaryotes (A) can contain multiple open reading frames; eukaryotic transcriptional units (B) can have only one ORF each

  5. Figure 6.4: The eukaryotic promoter, defined by an assemblage of interacting protein transcription factors bound to DNA

  6. Figure 6.5: A eukaryotic mRNA is processed by splicing after transcription to remove introns and join exons into a continuous coding sequence

  7. Figure 6.6: Consensus promoter sequences based on a few strong E. coli promoters

  8. Figure 6.7: The six possible reading frames within a short piece of double-stranded DNA

  9. Figure 6.8: Output from NCBI’s ORF Finder program Courtesy of ORF/National Center for Biotechnology Information

  10. Figure 6.T1: Promoter sequences recognized by some E. coli sigma factors

  11. Figure 6.T2: One-letter code for ambiguous nucleotides

  12. Figure 6.9: The splicing process and consensus sequences at the exon-intron boundaries and branch site

  13. Figure 6.T3: Codon usage table for human genes

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