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Matlab Demo #1. ODE-solver with parameters. Summary. Here we will Modify a simple matlab script in order to split the tasks to be sent to the cluster ( slurm ) Write a good submission script and send multiple jobs as an array ( parameter sweep )

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Matlab Demo #1


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matlab demo 1

Matlab Demo #1

ODE-solver with parameters

summary
Summary

Here wewill

  • Modify a simplematlabscript in order to split the tasks to besent to the cluster (slurm)
  • Write a goodsubmissionscript and sendmultiplejobsas an array (parametersweep)
  • Collect the results in the end
  • Learnaboutresourcestakenbyourjob for the futuretasks
serial code to work with
Serial code to work with

Simplecode, thatsolvesordinarydifferentialequationand prints the graph.

migrating to the cluster
Migrating to the cluster

Weneed to modifycode to worknon-interactively

Intermediateresultsmustbesaved to disk

Remember to ”quit”

slide5

Working with SLURM

  • Submissionscriptusing
    • local disk
    • Arrayjobs
    • Modules
    • Play-queue (for demo only)

Submission and

checkingslurm status with ”slurm” command.

analysis
Analysis

Collectinformation for the next set of jobs