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Academic Task Overview for Week 2: PolyComm, Allocation, and Roster Review

This week includes reviewing old tasks, checking PolyComm system, roster updates, LONI account status, homework reviews, and preparations for the coming week. Stay informed and prepared for academic tasks ahead!

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Academic Task Overview for Week 2: PolyComm, Allocation, and Roster Review

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  1. Wednesday of Week 2 • OLD STUFF • PolyComm: Check? • Roster • Review Drop Box • VMD/NAMD • LONI Allocation • Review of Homeworks in DropBox • Friday: • continue homework • Start structure check

  2. Polycom: This works? • Please note, the remote sites will need to dial into the mcu at 138.47.18.70 Kathy Caraway • LA TECH CIT 318-257-2912

  3. Allocation Membership = Roster • Status of LONI accounts? • 15 students • 5 faculty signed up • These faculty are admins so they can add you • Steve Rick • Michal Brylinski • Dorel Moldovan • Tom Bishop • Collin Wick

  4. LONI: LOOKS DONE • http://www.loni.org/systems/accounts/ • ACCOUNT: you must request a login • ALLOCATION: this is allotment of time • You can join loni_lasigma_md

  5. DropBox: Getting there. • https://www.dropbox.com/ • LASIGMA-MD https://www.dropbox.com/sh/nv66ww4971g3rqp/g9x_qO5RGu Looks like you'll need an invite

  6. Back to Class

  7. Review of Homeworks Submitted -proof of vmd install -proof you're doing something -chance to share info/ideas -chance for ya'll to use polycom-> technical

  8. HOMEWORK Assignment • Continue work on VMD TUTORIAL • Pick a protein from • Www.rcsb.org • Work thru VMD structure check for Friday Tutorial_structurecheck.pdf structurecheck-tutorial-files.zip GOALS: Test VMD and NAMD First “use of force field”

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