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HISP: Data-driven portal for hadron therapy . Faustin Laurentiu Roman CERN / IFIC faustin.roman@cern.ch. Prototype architecture Tools, implementation & services Conclusions (& demo). HISP: Data-driven portal for hadron therapy .

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slide1

HISP: Data-driven portal for hadron therapy

Faustin Laurentiu Roman

CERN / IFICfaustin.roman@cern.ch

  • Prototype architecture
  • Tools, implementation& services
  • Conclusions (& demo)

PARTNER-Grid Teleconference, CERN 26.01.2011, faustin.roman@cern.ch

slide2

HISP: Data-driven portal for hadron therapy

  • Unifiedpatient record over heterogeneous resources and distributedtreatment centers
  • (raw) data stays in each hospital (DB, XLS, PDF)
  • Info is linked using database federation
  • Data meaning described using a semantic framework
  • Follow-up accessible by all actors (MD, patient)
  • Secure access to intuitive forms
  • Interoperable: use industry standards (openEHR?)
  • See EGI User Forum contribution (oral presentation): https://www.egi.eu/indico/contributionDisplay.py?contribId=94&sessionId=18&confId=207

PARTNER-Grid Teleconference, CERN 26.01.2011, faustin.roman@cern.ch

slide3

Tools

  • Liferay: Free and Open source Enterprise portal, (www.liferay.com)
    • out of the box: user registration, document management, lucene-based search, awikis, news feeds, social chat

+ third-party community-contributed add-ons

  • Vine Toolkit:open source software framework used to create Grid-aware web applications. (vinetoolkit.org)
    • Create web application based on Flex technologies.
    • Add Grid context to the web components with the relevant plugins.
    • Abstract different middlewares implementation details.
  • TEIID: data virtualization system that allows applications to use data from multiple, heterogenous data stores
  • Interfaces: Java, Adobe Flex
  • Grid resources: VOMS, LFC, DPM

PARTNER-Grid Teleconference, CERN 26.01.2011, faustin.roman@cern.ch

slide4

Big picture…

PARTNER-Grid Teleconference, CERN 26.01.2011, faustin.roman@cern.ch

slide5

Overview

  • Present status
    • LiferayPortal: data recording based on product portlet, form generation, user management, cgMDRconnection
    • VINE Toolkit: VOMS, LFC, SE
    • Resource federation framework based on TEIID
    • MySQLDB: draft EHR and portal
  • Next steps
    • TEIID integration with resources and portal
    • Data annotation using tags and links to cgMDR
    • DPM-DICOM storage

Hadrontherapy Workshop, Sibiu, RO 12.11.2010, faustin.roman@cern.ch

slide6

Database screenshots

VIRTUAL DB view

Relational DB

CSV File

Sample Medical Record in MySQL DB

PARTNER-Grid Teleconference, CERN 26.01.2011, faustin.roman@cern.ch

slide7

DEMO @ http://vopartner01.cern.ch:8080/

Login/Register to vo.partner.eu

PARTNER-Grid Teleconference, CERN 26.01.2011, faustin.roman@cern.ch

slide8

Registration

Terms of use

Hadrontherapy Workshop, Sibiu, RO 12.11.2010, faustin.roman@cern.ch

slide9

eReferral service

Based on existing portlet

Hadrontherapy Workshop, Sibiu, RO 12.11.2010, faustin.roman@cern.ch

slide10

eReferral functions

Add

History

Referral Stage

Search

Referral Agreement

Browse

PARTNER-Grid Teleconference, CERN 26.01.2011, faustin.roman@cern.ch

slide11

Patient record

Patient Details

Images

Status of referral

PARTNER-Grid Teleconference, CERN 26.01.2011, faustin.roman@cern.ch

slide12

Simple Forms

PARTNER-Grid Teleconference, CERN 26.01.2011, faustin.roman@cern.ch

slide13

Administration

PARTNER-Grid Teleconference, CERN 26.01.2011, faustin.roman@cern.ch

slide14

Needs Ideas

  • Parallel install (done in VM)
  • VINE team / CERN VOMS people?
  • Grid people, e.g. IFIC resources
  • CERNcourses
  • Difference? Implementations?
  • Implementations?
  • CREATIS / DICOM-DPM
  • Built-in?
  • cgMDR
  • other?
  • VINE (OMII)
  • Portal devel
    • Liferay 6
    • Better VOMS integration
    • Resource integration
  • Data federation
    • JAVA
    • J2EE web services
  • Data model
    • Storage: openEHR / IHE
    • Exchange: ISO13606
    • Interface: DICOM/HL7
  • Provenance
    • Logging & Audit
  • Data meaning
      • Use tags
      • Semantic framework
  • Security
    • SAML

PARTNER-Grid Teleconference, CERN 26.01.2011, faustin.roman@cern.ch