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This study explores the computational approach, statistical analysis, and challenges in developing a Ligand Knowledge Base for Phosphorus Ligands, focusing on their geometry, electronic structure, and importance in transition metal complexes. The research delves into variable energetic and geometrical factors, statistical methods like Principal Component Analysis, and the outlook for further exploration in ligand sets.
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Natalie FeyCombeDay, 8 January 2004 @ University of Southampton Development of a Ligand Knowledge Base for Phosphorus Ligands
Overview • Introduction • Computational Approach • Statistical Analysis • Results • Challenges • Outlook
Introduction • Ligand Knowledge Base • mine CSD and other databases • geometry of metal complexes (bond lengths, angles, conformations) • supramolecular interactions • experimental data • supplement by calculated data • geometry, conformational freedom • electronic structure • transition states • complexes not structurally characterised
Introduction • Phosphorus Ligands, PX3 (X = R, Hal, Ar, OR, OAr, NR2, mixed) • widespread use as ligands in transition metal complexes • tune steric and electronic properties • importance in homogeneous catalysis • established measures of steric and electronic properties • steric: Tolman’s cone angle, solid angle, Brown’s steric parameter, Orpen’s S4’ parameter • electronic: Tolman’s electronic parameter (CO), pKa, PA, IE, EB, CB, CO • Tolman, Brown, QALE (Prock, Giering)
Computational Approach • Problems with TM Complexes • treatment of large numbers of electrons, electron correlation • geometrical effects of partially filled d-orbitals (spin states, Jahn-Teller effects) • variable coordination numbers and modes • suitable data for verification • Density Functional Theory • Jaguar, BP86/6-31G* on ligands, LACV3P on metal
Complexes free ligand (PX3) phosphorus ligand cation ([HPX3]+) H3B(PX3) OPX3 [(PH3)5Mo(PX3)] [Cl3Pd(PX3)]- [(PH3)3Pt(PX3)] Variables energetic: EHOMO, ELUMO, PA, BDE, He(steric) NBO charges of MLn fragments coordinated to PX3 geometrical: (P-X), (X-P-X), d(P-M), geometry of M-L fragment (cis, trans effects, L-M-L) Computational Approach
Statistical Analysis • Bivariate Correlations • linear, non-linear • Hierarchical Clustering • identify groups by measuring distance in multi-dimensional space • Principal Component Analysis • reduce number of variables by formulation of principal components (linear combinations of variables which account for maximum of variation in original variables) • chemical interpretation of PCs? (steric, electronic (, ))
Results • Pearson Correlations • identify linearly correlated variables • use to reduce number of variables • fewer complexes to optimise • simplify interpretation of PCs • e.g. [Cl3Pd(PX3)]- and [(PH3)3Pt(PX3)]:
Results • Hierarchical Cluster (Pearson Correlation, STD=1, B & Pt data)
Challenges • selection of complexes and variables • treatment of bidentate phosphorus ligands • expansion to other ligand sets • chemical interpretation of principal components • steric and electronic effects contribute to variables • reliability of established measures (cone angles) • robustness of analysis • variation in ligand set and variables (high correlation) • exploration of conformational space • treatment of multiple minima • automation of calculations, data analysis, statistical analysis • eliminate data transfer mistakes • reliable error behaviour
started expansion of ligand sets explore model building predict experimental and calculated data from subset of variables linear, non-linear explore measures of quantum similarity (Fukui function, HSAB) Outlook
Acknowledgements • Guy Orpen, Jeremy Harvey • Athanassios Tsipis, Stephanie Harris • Funding: