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Comparative Expression Analysis of Chloroplast-Targeted CuZn-SOD Genes under Different Light Conditions

This study evaluates the expression of chloroplast-targeted CuZn-SOD genes under varying light conditions using RNA-Seq data analysis. Absolute expression levels in RPKM and fold-change in expression from limiting to excess light are compared. Statistical significance is indicated for each gene separately and combined. Significant differences in gene expression under different light conditions are highlighted.

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Comparative Expression Analysis of Chloroplast-Targeted CuZn-SOD Genes under Different Light Conditions

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  1. Glyma11g19840 Glyma12g08650 Glyma12g30260 Combined a b a a a b a a b a a a RPKM - LL a ab b a a b a b a a a b RPKM - EL * * Ln(EL/LL) * * * D4 D4 D4 D4 D3 D3 D3 D3 T2 T2 T2 T2 Supplementary Figure S4. Chloroplast-targeted CuZn-SOD gene expression. The first row shows absolute expression (RPKM) by species under limiting light for each gene separately and combined. The second row shows the same for excess light. The third row shows the natural log of fold-change in expression from limiting to excess light. In rows one and two, letters above columns indicate statistical significance – categories not sharing a letter differ significantly at P < 0.05. In row three, asterisks indicate significant differences in expression (FDR < 0.05) between limiting and excess light.

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