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The Components of Life. Organic Chemistry. 4 Big Ones…. I. Organic Chemistry. Compounds created by living organisms are organic compounds . Organic chemistry studies all compounds that have bonds between carbon atoms. A. Carbon: (2 reasons carbon is important).
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The Components of Life Organic Chemistry
I. Organic Chemistry • Compounds created by living organisms are organiccompounds. • Organicchemistry studies all compounds that have bonds between carbon atoms.
A. Carbon: (2 reasons carbon is important) • 1st: Carbon has 4 valenceelectrons which are those that are involved in chemicalreaction. • So carbon can bond to four different elements.
Figure 2-11 Carbon Compounds Section 2-3 Methane Acetylene Butadiene Benzene Isooctane Go to Section:
2nd: Carbon atoms can bond to other carbon atoms to form single or double or triple bonds. • This allows carbon to form long chainsthat can be almost any length and loop to form cyclic structures.
B. Organic Compounds: • 1. 1. Not all molecules in living organisms are organic. Ex: Water and Salt • 2. Four types of large organic compounds (macromolecules) include: • i. proteins • ii.carbohydrates • iii. lipids • iv. nucleic acids
Carbohydrates Lipids Nucleic acids Proteins Sugars and starches Fats and oils Nucleotides Amino Acids Carbon, hydrogen, oxygen Carbon, hydrogen, oxygen Carbon, hydrogen,oxygen, nitrogen, Carbon,hydrogen, oxygen, nitrogen, phosphorus Concept Map Section 2-3 Carbon Compounds include that consist of that consist of that consist of that consist of which contain which contain which contain which contain Go to Section:
3. Macromolecules are formed when smaller molecules called monomers are joined together in a process known as polymerization. • 4. Polymerization forms polymers which may be made from hundreds or thousands of monomers
Examples of compounds: • Organic • Carbohydrates • Protein • Lipids/fats • Nucleic acids • Enzymes • Carbon-based polymers • Non-organic • Salts • Minerals and simple elements • Water • Ionic compounds • Compounds without carbon
II. Carbohydrates • A. Structure of Carbohydrates: • 1. macromolecules made up of carbon, hydrogen and oxygen • usually in a ratio of 1:2:1 • B. Purposes of carbohydrates: • 1) primary source of fast energy • 2) structural purposes for plants and some animals
C. Monosaccharides are the simplest kinds of carbohydrates. • 1. Used by plants during photosynthesis to store glucose as starch • Examples: • Fructose- found in many fruits • Glucose- stored as starch • Galactose- found in milk
D. Polysaccharides • 1. Larger carbohydrates-”poly” means many so these compounds are “many sugars” linked together with covalent bonds. • 2. Examples:
a. Starch produced when sugarmolecules form a chain • b. Glycogen-type of animal starch to store excess sugars • c. Cellulose-used in cell walls of plants
Figure 2-13 A Starch Section 2-3 Starch Glucose Go to Section:
III. Lipids--Section 4.3 • organic molecules • Can be of fats, waxes, or steroids. • Fewer oxygen atoms than carbohydrates. • Not soluble in water.
A. Fats can be used to store energy but are used for long term storage. • Made of Glycerol + 3 fatty acid molecules
G------Fatty acid • L • Y • C------Fatty acid • E • R • O • L-------Fatty acid
Lipids continued… • 2. Some are saturated fats having the maximum number of hydrogen atoms possible.
3. Examples of saturated fats are butter, shortening, and lard. • .
4. Unsaturated fats have one doublecarbon to carbon bond. • 5. Polyunsaturated fats have more than one doublebond. They are liquids at room temperature
Not all fats are bad…. • 6. Humans need some fat to live. Two essential fats are omega-3 and omega-6 found in cold water fish,nuts and seeds.
Other lipids… • 7. Waxes form coverings on leaves, skin, or fur.
B. Phospholipids: • Similar to fats but have a phosphate group instead of a 3rdfatty acid. • Found in the cellmembrane.
C. Steroids: • 1. The chemical structure of a steroid contains 4 carbonrings. • 2. Arranged in 6,6,6,5 format. • 3. Cholesterol is a steroidthat is used to make hormones.
IV. Proteins-Section 4.4 • A. Functions of Proteins: • 1. Form the main structural component of skeletal muscle, skin, cartilage, tendons, ligaments, horns,bone, hair and feathers.
Receptors that detect chemical signals so that cells can respond to stimuli • Important in the movement of muscles and for movement of many cells.
More functions of proteins: • Serve as antibodiesto protect against diseases. • Highly specialized as enzymes • Help transport substances through the body • Provide storage for elementslike iron.
B. Amino Acids: • 1. Are the building blocks of proteins. • 2. Contain C, H, O, and nitrogen(N). • 3. Are joined together by a type of covalent bond called a peptide bond. • 4. Chains of amino acids are called polypeptides and may contain as many as 3000 amino acids.
Figure 2-16 Amino Acids Section 2-3 Amino group Carboxyl group General structure Alanine Serine Go to Section:
Figure 2-16 Amino Acids Section 2-3 Amino group Carboxyl group General structure Alanine Serine Go to Section:
Figure 2-16 Amino Acids Section 2-3 Amino group Carboxyl group General structure Alanine Serine Go to Section:
Figure 2-17 A Protein Section 2-3 Amino acids Go to Section:
VI. Nucleic Acids--Section4.6: • A. Nucleic Acids are: • 1. Macromolecules containing C, H, O, N and phosphorus (P). • 2. Made of units called nucleotides • Each nucleotide is made of 3 parts • Sugar • Phosphate group • Nitrogen base
B. Two types of Nucleic acids: • 1. Deoxyribonucleic Acid (DNA) contains deoxyribose (sugar) • DNA is shaped like a double helix or a twisted ladder -Discovered by Watson and Crick
DNA: • It is made of nucleotides ; each contain one of four bases. • The four bases are adenine (A), guanine (G), cytosine (C), thymine (T)
The backbone of the ladder is formed by the sugars and the phosphates • The rungs of the ladder are formed by hydrogen bonds between base pairs • Adenine – Thymine • Guanine - Cytosine
2. Ribonucleic Acid (RNA) contains ribose sugar. • Main function is protein synthesis. • RNA is a single stranded • RNA bases are A, G, C and Uracil (U). There is no Thymine in RNA. • Bases are adenine-uracil cytosine-guanine
VII. Enzymes--Section 4.6 • A. Enzymes are specialproteins that allow certain chemical reactions to occur that normally would occur too slowly or require too much energy to be practical inside living things. • B. Enzymes act as catalysts which lower the amount of energy needed and speed up the reactions.
Effect of Enzymes Section 2-4 Reaction pathway without enzyme Activation energy without enzyme Activation energy with enzyme Reactants Reaction pathway with enzyme Products Go to Section:
Figure 2-19 Chemical Reactions Section 2-4 Energy-Releasing Reaction Energy-Absorbing Reaction Activation energy Products Activation energy Reactants Reactants Products Go to Section:
Figure 2-19 Chemical Reactions Section 2-4 Energy-Releasing Reaction Energy-Absorbing Reaction Activation energy Products Activation energy Reactants Reactants Products Go to Section:
C. Enzymes are very specific. • They work only on certain substances called substrates. • Each substrate has an area on it called the active site. • The active site and the shapeof the substrate fit together like pieces of a puzzle.
The the two pieces don’t fit, the enzyme will not work. This specific fit is called the lock and key model. • If the enzyme does fit, it remains there until the reaction is complete and then it is released to be used in another reaction.