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StrainInfo

WFCC. StrainInfo.net. Developing Information Commons for Science in Europe. CODATA-Science Commons, The Academy Palace, Brussels, 15 th september 2006. Integrating the Microbiological Commons. Peter Dawyndt Tom Dedeurwaerdere. An emerging information jungle. ?. Focus on integration.

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StrainInfo

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  1. WFCC StrainInfo.net Developing Information Commons for Science in Europe CODATA-Science Commons, The Academy Palace, Brussels, 15th september 2006 Integrating the Microbiological Commons Peter Dawyndt Tom Dedeurwaerdere

  2. An emerging information jungle ?

  3. Focus on integration

  4. Focus on integration

  5. Divide-and-conquer strategies specimen knuckle sequence knuckle literature knuckle taxonomy knuckle

  6. Divide-and-conquer strategies specimen knuckle sequence knuckle literature knuckle taxonomy knuckle

  7. StrainInfo.net bioportal scope specimen knuckle sequence knuckle literature knuckle taxonomy knuckle

  8. WFCC

  9. Biodiversity hotspots

  10. original isolate W.W. Ford (13) first BRC deposit NCIMB 9373 new isolate Accession form Accession form Accession form Accession form Domain-specific regulatory bodies Registration Authority end user GUID: Ford 13 T. Gibson (971) GUID: Gibson 971 GUID: NCIMB 9373 GUID: new isolate GUID: NCTC 2599 NCTC 2599 NRRL B-3711 GUID: NRRL B-3711 GUID: ATCC 14579 ATCC 14579 culture entities isolate entities end user end user strain number equivalence relation strain number resolution (disambiguation) strain deposit history relation BRC resolution (online catalogues)

  11. The science commons in the bio-economy Social legitimacy : Build trust and new beliefs as a basis for cooperation between the actors Economic efficiency : Documenting the flow of resources through the entire innovation chain

  12. Collective management organisation : ex ante negotiation of the contractual template Commercial license Commercial firm Third party Proprietary R&D Copyleft license Key Data Licensing negotiation Other open science users Institutional design : two tiered system Tom Dedeurwaerdere, “The Institutional Economics of Sharing Biological Information”, International Social Science Journal , forthcoming, fall 2006.

  13. Origin Border authority or national institutions BRC / source End users 1 numerical identifier Country of origin Reflexive Governance : organising the feedback of the actors on the institutional design Example : sector specific negotiation of tracking system (IPEN, Mosaicc, Kew Garden, etc.) • Database containing : • numerical identifiers • + in metadata : info on country of origin Tom Dedeurwaerdere, "Bioprospecting, intellectual property law and evolutionary economics: the stake of a theory of reflexive governance", in Innovative Roles of Biological Resources Centres, WFCC, 2004..

  14. S T R A I N I N F O N E T Bart Vanbrabant Peter Dawyndt Bernard De Baets Xianhua Zhou Juncai Ma Jean Swings Philippe Desmeth Tom Dedeurwaerdere Paul De Vos A “semantic web”-enabled bioportal for integrating microbial information into global bioinformatics networks

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