'Smaller motif finding problem' presentation slideshows

Finding Regulatory Motifs

Finding Regulatory Motifs. Regulatory Motif Discovery. DNA. Find motifs within groups of corregulated genes. Common subsequence. Group of co-regulated genes. slide credits: M. Kellis. Characteristics of Regulatory Motifs. Tiny Highly Variable ~Constant Size

634 views • 48 slides

Motif Finding

Motif Finding. Regulation of Genes. Transcription Factor (Protein). RNA polymerase (Protein). DNA. Gene. Regulatory Element. Regulation of Genes. Transcription Factor (Protein). RNA polymerase. DNA. Regulatory Element. Gene. Regulation of Genes. New protein. RNA polymerase.

458 views • 34 slides

Motif Finding

Motif Finding. Regulation of Genes. Transcription Factor (Protein). RNA polymerase (Protein). DNA. Gene. Regulatory Element. Regulation of Genes. Transcription Factor (Protein). RNA polymerase. DNA. Regulatory Element. Gene. Regulation of Genes. New protein. RNA polymerase.

444 views • 34 slides

Gene Regulation and Microarrays

Gene Regulation and Microarrays. Finding Regulatory Motifs. Given a collection of genes with common expression, Find the TF-binding motif in common. Characteristics of Regulatory Motifs. Tiny Highly Variable ~Constant Size Because a constant-size transcription factor binds

392 views • 30 slides

Gene Regulation and Microarrays

Gene Regulation and Microarrays. Finding Regulatory Motifs. Given a collection of genes with common expression, Find the TF-binding motif in common. Characteristics of Regulatory Motifs. Tiny Highly Variable ~Constant Size Because a constant-size transcription factor binds

403 views • 30 slides

(Regulatory-) Motif Finding

307 views • 30 slides