'Sequence alignment' presentation slideshows

Lecture 2. Optimal Sequence Alignment

Lecture 2. Optimal Sequence Alignment. The Chinese University of Hong Kong CSCI3220 Algorithms for Bioinformatics. Lecture outline. Problems related to sequences Core: Sequence alignment Sequence alignment Problem components Difficulty Methods (focused on optimal methods in this lecture)

1.06k views • 81 slides

BLAST Similarity Searching

BLAST Similarity Searching. Spring 2008 Clark University. BLAST. BLAST (Basic Local Alignment Search Tool) allows rapid sequence comparison of a query sequence against a database. The BLAST algorithm is fast , accurate , and web-accessible . Why use BLAST?.

1.6k views • 75 slides

Natural Language Processing for the Web

Natural Language Processing for the Web. Prof. Kathleen McKeown 722 CEPSR, 939-7118 Office Hours: Wed, 1-2; Tues 4-5 TA: Yves Petinot 719 CEPSR, 939-7116 Office Hours: Thurs 12-1, 8-9. Projects. Proposal due today Hand in via courseworks (by midnight). Today.

746 views • 62 slides

Cluster Computer For Bioinformatics Applications

Nile University, Bioinformatics Group. Cluster Computer For Bioinformatics Applications. Hisham Adel 2008. Done By:. Hisham Adel Hassan. Supervised by: Dr. Mohamed Aboualhouda. Points. Introduction. Cluster and Supercomputers. Cluster Types and Advantages. Our Cluster.

924 views • 52 slides

Protein Analysis Course

Protein Analysis Course. Day 1: Databases, dotplots and pairwise alignment. Todays timetable. Databases and file formats Exercises Dotplot and pairwise alignment Exercises Coffee breaks during the exercises. Databases and file formats. Sequence file format FASTA

672 views • 52 slides

BMI 731

669 views • 43 slides

ALIGNMENT OF NUCLEOTIDE & AMINO-ACID SEQUENCES

ALIGNMENT OF NUCLEOTIDE & AMINO-ACID SEQUENCES.

671 views • 40 slides

Proteins ? 1D ? 3D

567 views • 40 slides

Modeling and Understanding Stress Response Mechanisms with Expresso

583 views • 38 slides

NCBI Cn3D4.1 MMDB Structure Tools

1.28k views • 36 slides

???? bioinformatics

???? bioinformatics. ???. Bioinformatics. ?? information. ?? (information) ?????????????????????????????????????? ????????????????????????????????????????? . What is Bioinformatics?. Computer Science. Mathematics and Statistics. ????? ???? ??? ???? ????? ????? ????? ????

543 views • 30 slides

Protein Classification II

Protein Classification II. CISC889: Bioinformatics Gang Situ 04/11/2002. Parts of this lecture borrowed from lecture given by Dr. Altman. Outline. Terminology Classes of protein structures Why do we need to align structures Viewing protein structures and

510 views • 29 slides

Sequence Alignment Tutorial #2

439 views • 17 slides

Iowa State University College of Liberal Arts and Sciences Bioinformatics & Computational Biology Undergraduate Majo

Iowa State University College of Liberal Arts and Sciences Bioinformatics & Computational Biology Undergraduate Major (BCBIO). BCBIO. Intro to BCBIO major.

311 views • 16 slides

Blue Gene for Protein Structure Prediction (Predicting CASP Targets in Record Time)

Blue Gene for Protein Structure Prediction (Predicting CASP Targets in Record Time). Ross C. Walker. The CASP Competition. What is CASP? Critical Assessment of Techniques for Protein Structure Prediction (CASP) Biennial competition in protein structure prediction

363 views • 16 slides

General Phylogenetics

Points that will be covered in this presentation Tree Terminology General Points About Phylogenetic Trees Phylogenetic Analyses The importance of Alignments The different analysis methods Tree confidence measures. General Phylogenetics. Tree Terminology.

383 views • 15 slides

PHYLOGENY

PHYLOGENY. Porcine insulin and human diabetes. Since 1982 people with insulin-dependent diabetes have been using recombinant human insulin. Prior to this time the most common insulin source was porcine (pig) insulin. Sheep and cows are killed for food in large numbers every day.

462 views • 13 slides

Bayesian Evolutionary Analysis by Sampling Trees (BEAST)

Bayesian Evolutionary Analysis by Sampling Trees (BEAST). LEE KIM-SUNG Environmental Health Institute National Environment Agency. Analysis of Sequence Variation. Polymorphisms Phylogenetics Statistic and evolution Parameter estimation Hypothesis testing. BEAST.

860 views • 13 slides

NMR vs. Crystallography for CHEM 645

NMR vs. Crystallography for CHEM 645. Brian Bahnson Department of Chemistry & Biochemistry University of Delaware. Distance Restraints. Through space - NOE. NOE ? 1/r 6 . f ( t c ). Tortional Restraints through bond J-coupling. NMR Refinement. ideal geometry. NMR term.

843 views • 12 slides

DNA alphabet

433 views • 7 slides