'Molecular function' presentation slideshows

Biochemistry and Energy Transformation Units

Biochemistry and Energy Transformation Units. NiAbi, Connor, Michael, and Jean. Chapter 4. Vocabulary. Organic Chemistry- The study of carbon compounds (organic compounds) Hydrocarbons - Organic molecules consisting only of carbon and hydrogen

1.87k views • 156 slides

GO: The Gene Ontology

GO: The Gene Ontology. Pascale Gaudet dictyBase curator Northwestern University, Chicago, IL. Outline. Introduction to the Gene Ontology Gene Ontology annotations Editing the Gene Ontology Practical applications for the Gene Ontology

1.48k views • 100 slides

640 views • 47 slides

amo amos amot amomus amotis amont . Happy birthday Swiss-Prot Fortaleza August 2006

amo amos amot amomus amotis amont . Happy birthday Swiss-Prot Fortaleza August 2006. Three (Orthogonal) Ontologies. Biological Process Goal or objective within cell, tissue .. Molecular Function Elemental activity or task Cellular Component

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Canadian Bioinformatics Workshops

553 views • 40 slides

Basic reading, writing and informatics skills for biomedical research

Basic reading, writing and informatics skills for biomedical research. Segment 2. Introduction to the virtual library. A brief history of scientific publishing.

489 views • 32 slides

Understanding protein lists from proteomics studies

Understanding protein lists from proteomics studies . Bing Zhang Department of Biomedical Informatics Vanderbilt University bing.zhang@vanderbilt.edu. A typical comparative shotgun proteomics study. IPI00375843 IPI00171798 IPI00299485 IPI00009542 IPI00019568 IPI00060627 IPI00168262

360 views • 25 slides

Linking Animal Models to Human Diseases

Linking Animal Models to Human Diseases. Supported by NIH P41 HG002659 and U54 HG002659 the University of Oregon, Eugene, OR. http://zfin.org. Goals Annotate zebrafish phenotypes Identify human disease models Example - holoprosencephaly Progress. Zebrafish disease models:.

375 views • 23 slides

Using IPA to study immune cells

Using IPA to study immune cells. CSC workshop on Pathway Analysis Espoo, November 12, 2007 Helena Ahlfors Turku Centre for Biotechnology. Lehtonen & Ahlfors et al. Journal of Leukocyte Biology, 2007. Aim of the study.

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PMID:15889139

PMID:15889139. Mutations in two, or more, genes. IGI. Biological Process:. meiosis?. Mutations in a single gene. IMP. homologous recombination?. Physical interactions between proteins. IPI. with:. SGS1. TOP3. Cellular Component:. complex involving Sgs1p, Top3, and Rmi1p. IMP.

329 views • 20 slides

Genome annotation and search for homologs

Genome annotation and search for homologs. Genome of the week. Discuss the diversity and features of selected microbial genomes. Link to the paper describing the genome on the MMG433 website. Bacillus subtilis. Gram-positive soil bacterium Genetically tractable, well-studied

365 views • 20 slides

Formalizations of Function & Literature Databases

Formalizations of Function & Literature Databases. Protein function prediction. What is function ? Various levels of description. What is function?. Contextual / philosophical point operational dichotomy I often use: biochemical function vs biological role:

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Genome analysis and annotation Part II

Genome analysis and annotation Part II. Modeling a gene. S.mansoni PASA assemblies. S. japonicum EST alignments. Genewise alignments(predictions). nr Protein Alignments. Caenorhabditis sp. Protein Alignments. Brugia malayi Protein Alignments. Evidence View.

277 views • 15 slides

Genome analysis and annotation Part II

Genome analysis and annotation Part II. Modeling a gene. S.mansoni PASA assemblies. S. japonicum EST alignments. Genewise alignments(predictions). nr Protein Alignments. Caenorhabditis sp. Protein Alignments. Brugia malayi Protein Alignments. Evidence View.

293 views • 15 slides

Gene action in a mouse model for Down syndrome

Gene action in a mouse model for Down syndrome. Joan T. Richtsmeier Department of Anthropology The Pennsylvania State University http://oshima.anthro.psu.edu. Down Syndrome. Down Syndrome Features. Inconsistent. Consistent. Characteristic facies Alzheimer-like histopathology

326 views • 14 slides

Gene Ontology (GO) http://www.geneontology.org/

Gene Ontology (GO) http://www.geneontology.org/.

534 views • 14 slides

Scope of the Gene Ontology Vocabularies

Scope of the Gene Ontology Vocabularies. GO Project Goals:. Compile structured vocabularies describing aspects of molecular biology Describe gene products using vocabulary terms (annotation) Develop tools: to query and modify the vocabularies and annotations

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?Check sequences

D. D. TAIR?. E. coli?. ?. ?. ISS. IDA, IMP, IGI, IC. IDA, IMP. IDA, IMP. ?. IMP. D. no EXP?. IDA, IMP, IGI, IPI. IDA. Human: P11388-- check. IDA, IMP, IPI. D. no EXP?. no EXP?. no EXP?. ?. ?Check sequences. Molecular Function. Questions:

265 views • 7 slides

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amn aor bla nbm cbe fco hyp plg ecc ece fce fcc fhi jca nca ret eye fat che hea hlv cje col duo ill jej lin sin eje nco nje cki kid cli liv eli fli clu lun elu nlu cly lyg lnt cga mcp mga mgp med bfe isp ldo mas sme ssp ste tbr vin ese nms

101 views • 1 slides