'Mage tab' presentation slideshows

ArrayExpress and Gene Expression Atlas: Mining Functional Genomics data

ArrayExpress and Gene Expression Atlas: Mining Functional Genomics data. Gabriella Rustici, PhD Functional Genomics Team EBI-EMBL gabry@ebi.ac.uk. Talk structure. Why do we need a database for functional genomics data? ArrayExpress database Archive Gene Expression Atlas Database content

743 views • 63 slides

ArrayExpress and Gene Expression Atlas: Mining Functional Genomics data

ArrayExpress and Gene Expression Atlas: Mining Functional Genomics data. Gabriella Rustici, PhD Functional Genomics Team EBI-EMBL gabry@ebi.ac.uk. Talk structure. Why do we need a database for functional genomics data? ArrayExpress database Archive Gene Expression Atlas Database content

770 views • 63 slides

ArrayExpress and Gene Expression Atlas: Mining Functional Genomics data

ArrayExpress and Gene Expression Atlas: Mining Functional Genomics data. Gabriella Rustici, PhD Functional Genomics Team EBI-EMBL gabry@ebi.ac.uk. Talk structure. Why do we need a database for functional genomics data? ArrayExpress database Archive Gene Expression Atlas Database content

633 views • 63 slides

ArrayExpress and Gene Expression Atlas: Mining Functional Genomics data

ArrayExpress and Gene Expression Atlas: Mining Functional Genomics data. Gabriella Rustici, PhD Functional Genomics Team EBI-EMBL gabry@ebi.ac.uk. Talk structure. Why do we need a database for functional genomics data? ArrayExpress database Archive Gene Expression Atlas Database content

634 views • 63 slides

MAGE-TAB workshop NCI, January 24, 2008

MAGE-TAB - a simple tab delimited format for describing microarray (and potentially other) experiments in a MIAME compliant way. MAGE-TAB workshop NCI, January 24, 2008. What is needed to describe a microarray (and potentially any) experiment adequately (MIAME)?.

496 views • 34 slides

MAGE-TAB workshop NCI, January 24, 2008

MAGE-TAB - a simple tab delimited format for describing microarray (and potentially other) experiments in a MIAME compliant way. MAGE-TAB workshop NCI, January 24, 2008. What is needed to describe a microarray (and potentially any) experiment adequately (MIAME)?.

345 views • 34 slides

Data submission to AE

Data submission to AE. Data submission to AE www.ebi.ac.uk/microarray/submissions.html. MAGE-TAB Example. MAGE-TAB Submission. Ontology Link. Submitter is directed to either submit an experiment or download a template to the desktop. MAGE-TAB Submission.

315 views • 16 slides

Support for MAGE-TAB in caArray 2.0

267 views • 14 slides

The Penn Experience with MAGE-TAB

307 views • 14 slides

Support for MAGE-TAB in caArray 2.0

149 views • 14 slides

The Penn Experience with MAGE-TAB

159 views • 14 slides

MAGE-TAB - The ArrayExpress Production Experience

118 views • 11 slides

GenePattern

GenePattern. Overview for MAGE-TAB Workshop Ted Liefeld January 24, 2007. a platform for integrative genomics. Module Repository. Pipeline Environment. Client User Interfaces. all_aml_train. all_aml_test. KNN. GSEA. Preprocess. Preprocess. NMF. SVM. SOM Clustering. Class

112 views • 10 slides

MAGE-TAB in SMD-Land Cate Beauheim, Cathy Ball, Don Maier

MAGE-TAB in SMD-Land Cate Beauheim, Cathy Ball, Don Maier. One Validating Parser Graphical Interface to create and load into SMD. Requirements. Avoid the problem of multiple incompatible formats that has plagued MAGE-ML.

197 views • 5 slides