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A Graphical Investigation of Some Microarray Experiments

A Graphical Investigation of Some Microarray Experiments

A Graphical Investigation of Some Microarray Experiments. Brian S. Yandell Statistics , Horticulture, Biometry, University of Wisconsin-Madison www.stat.wisc.edu/~yandell/statgen. Key Questions. Why design microarray experiments? (Kerr Churchill) chips and samples are expensive

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598 views • 47 slides
Introduction to NMR Spectroscopy

Introduction to NMR Spectroscopy

Introduction to NMR Spectroscopy. Part I. Introduction. Nuclear Magnetic Resonance (NMR) Spectroscopy is a technique that is used to determine the type, number and relative positions of certain atoms in a molecule

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724 views • 40 slides
Mining for Low-abundance Transcripts in Microarray Data

Mining for Low-abundance Transcripts in Microarray Data

Mining for Low-abundance Transcripts in Microarray Data. Yi Lin 1 , Samuel T. Nadler 2 , Alan D. Attie 2 , Brian S. Yandell 1,3 1 Statistics, 2 Biochemistry, 3 Horticulture, University of Wisconsin-Madison September 2000. Basic Idea.

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448 views • 33 slides
Proteomics

Proteomics

Proteomics. The proteome is larger than the genome due to alternative splicing and protein modification. As we have said before we need to know All protein-protein interactions. One protein or peptide may have multiple functions depending on context. Regulation of protein function.

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792 views • 30 slides
Lecture 8. Chemical Properties Of Soils

Lecture 8. Chemical Properties Of Soils

Lecture 8. Chemical Properties Of Soils. IMPORTANT DATE. Oct. 2. Forest Ecology 1st exam (in class) BRING A CALCULATOR. I. Soil Acidity. pH pH Range of forest soils. I. Soil Acidity. pH: a measure of the soil acidity, or H ion concentration. 1 pH = log ------ H+

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838 views • 30 slides
Microbiology/Metabolomics Core John Cronan and Jonathan Sweedler Enzyme Function Initiative (EFI)

Microbiology/Metabolomics Core John Cronan and Jonathan Sweedler Enzyme Function Initiative (EFI)

Microbiology/Metabolomics Core John Cronan and Jonathan Sweedler Enzyme Function Initiative (EFI) Advisory Committee Meeting November 30, 2011. Outline. Experimental scope Infrastructure Targets YidA from E. coli ( HAD ) YghU , YfcF , and YfcG from E. coli ( GST )

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457 views • 29 slides
Delon Toh

Delon Toh

Delon Toh. Pitfalls of 2 nd Gen. Amplification of cDNA Artifacts Biased coverage Short reads Medium ~100bp for Illumina 700bp for 454. 3 rd Gen: PacBIO RS. Real-time single molecule sequencer No amplification = no bias Produces long reads Median ~2246 Max~23000

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315 views • 17 slides

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