'Longest common substring' presentation slideshows

Algorithms in Bioinformatics: A Practical Introduction

Algorithms in Bioinformatics: A Practical Introduction. Suffix tree. Overview. What is suffix tree? Simple application of suffix tree Linear time algorithm for constructing suffix tree Suffix array FM-index 1-mismatch search. Suffix. 1. acacag$. 2. cacag$. 3. acag$. 4. cag$. 5.

1.45k views • 111 slides

Comp. Genomics

Comp. Genomics. Recitation 3 (week 4) 26/3/2009 Multiple Hypothesis Testing+Suffix Trees. Based in part on slides by William Stafford Noble. What p-value is significant?. The most common thresholds are 0.01 and 0.05. A threshold of 0.05 means you are 95% sure that the result is significant.

346 views • 34 slides

Developing Pairwise Sequence Alignment Algorithms

Developing Pairwise Sequence Alignment Algorithms. Dr. Nancy Warter-Perez. Outline. Group assignments for project Overview of global and local alignment References for sequence alignment algorithms Discussion of Needleman-Wunsch iterative approach to global alignment

819 views • 33 slides

SUFFIX TREES

603 views • 27 slides

Extracting bilingual terminologies from comparable corpora

Extracting bilingual terminologies from comparable corpora. By: Ahmet Aker, Monica Paramita , Robert Gaizauskasl CS671: Natural Language Processing Prof. Amitabha Mukerjee Presented By: Ankit Modi (10104). Introduction.

340 views • 22 slides