'Isoform expression' presentation slideshows

Isoform expression - PowerPoint PPT Presentation

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Antigen recognition. out. + -. Lipid bilayer of plasma membrane. in. Signal transduction (contains one or more ITAMs). Src-family tyrosine kinase reversibly associated with receptor. Consensus ITAM (amino acid)

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419 views • 29 slides
Estimation of alternative splicing isoform frequencies from RNA- Seq data

Estimation of alternative splicing isoform frequencies from RNA- Seq data

Estimation of alternative splicing isoform frequencies from RNA- Seq data. Ion Mandoiu Computer Science and Engineering Department University of Connecticut Joint work with Marius Nicolae , Serghei Mangul , and Alex Zelikovsky. Outline. Introduction EM Algorithm Results

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320 views • 20 slides
Alex Zelikovsky Department of Computer Science Georgia State University Joint work with

Alex Zelikovsky Department of Computer Science Georgia State University Joint work with

Monte-Carlo Regression Algorithm for Isoform Frequency Estimation from RNA-Seq Data. Alex Zelikovsky Department of Computer Science Georgia State University Joint work with Adrian Caciula (GSU), Serghei Mangul (UCLA) James Lindsay, Ion Mandoiu (UCONN). Outline.

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155 views • 15 slides
Scalable Algorithms for Next-Generation Sequencing Data Analysis

Scalable Algorithms for Next-Generation Sequencing Data Analysis

Scalable Algorithms for Next-Generation Sequencing Data Analysis. Ion Mandoiu UTC Associate Professor in Engineering Innovation Department of Computer Science & Engineering. Next Generation Sequencing. Illumina HiSeq. Roche/454. SOLiD 5500. Ion Proton. PacBio RS. Oxford Nanopore.

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524 views • 11 slides
Parts Lists and the Isoform Problem

Parts Lists and the Isoform Problem

Parts Lists and the Isoform Problem. David Fruman AfCS Annual Meeting May 20, 2003. Issues with Isoforms. Many signaling components are members of gene families, or exist in multiply spliced forms; should we (and how should we) determine which isoforms are expressed?

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181 views • 11 slides

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