'Differentially expressed' presentation slideshows

1.21k views • 97 slides

Gene Expression Profiling Illustrated Using BRB-ArrayTools

Gene Expression Profiling Illustrated Using BRB-ArrayTools. Good Microarray Studies Have Clear Objectives. Class Comparison (gene finding) Find genes whose expression differs among predetermined classes Class Prediction

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CodeLink compatible

Microarray Analysis of Gene Expression in Huntington's Disease Peripheral Blood - a Platform Comparison. CodeLink compatible. Microarray Analysis of Gene Expression in Huntington's Disease Peripheral Blood - a Platform Comparison. General microarry data analysis workflow

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Differentially expressed genes

Differentially expressed genes. 09/19/07. Identify differentially expressed genes. Fold Change. Based on the expression index, select genes with high fold change (e.g., R/G > 3) Advantage: Intuitive Larger fold change may indicate greater biological impact. Drawback

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Estimating expression differences in cDNA microarray experiments

Estimating expression differences in cDNA microarray experiments. Statistics 246, Spring 2002 Week 8, Lecture 1. Some motherhood statements. Important aspects of a statistical analysis include: Tentatively separating systematic from random sources of variation

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Differential gene expression

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Test of significance for small samples Javier Cabrera

Test of significance for small samples Javier Cabrera. Outline. Differential Expression for small samples. C1 C2 C3 T1 T2 T3 G1 4.67 4.44 4.42 4.73 4.85 4.69 G2 3.13 2.54 1.96 0.97 2.38 3.36 G3 6.22 6.77 5.32 6.40 6.94 6.87

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Discussion of four presentations on Sarcomas with complex karyotypes

Discussion of four presentations on Sarcomas with complex karyotypes. JY Blay. Medical Oncology, Lyon UCBL1- CLB. GIST. Amplification 12q13-15 MDM2/CDK4. WD/DDLPS. Kinase Mutations. TSG NF1, TSC1/2. Sarcomas and locally aggressive connective tissue tumors. MPNST PEComas.

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Different Expression Multiple Hypothesis Testing

Different Expression Multiple Hypothesis Testing. STAT115 Spring 2012. Outline. Differential gene expression Parametric test: t and Welch-t test Non-parametric test: permutation t and Mann-Whitney Multiple hypothesis testing Family-wide error rate, and FDR

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Department of Veterinary Pathobiology College of Veterinary Medicine Texas A&M University

Temporal Transcriptional Analysis of the Early in vivo Initial Interactions of both Brucella & Bovine Host.

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Wieslawa Mentzen, Matteo Floris and Alberto de la Fuente

Network oncology: A nalysis of cancer gene expression in the context of protein interaction network and miRNA target motifs. Wieslawa Mentzen, Matteo Floris and Alberto de la Fuente. Analysis of cancer gene expression in the context of protein interaction network and miRNA target motifs.

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GUIDELINE FOR ABSTRACT WRITING

GUIDELINE FOR ABSTRACT WRITING. WHAT IS AN ABSTRACT? Ringkasan deskriptif atau informative sebuah laporan yang lebih panjang. Ditulis setelah laporan diselesaikan Muncul di halaman terpisah setelah halaman judul atau sebelum artikel itu sendiri Ditulis sebagai paragraph tunggal.

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Power study : some definitions

Power study : some definitions. Power is the probability of identifying a differentially expressed peak as such Power depends on (among others): Sample size Differential effect ?/? is an appropriate ratio to describe a differential effect. Simulations.

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Visualization tool for data analysis

Visualization tool for data analysis. Uma Chandran, PhD Department of Biomedical Informatics 1/11/2013. Research Questions. Gene expression signatures of estrogen response in breast versus bone versus endometrium

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PTTG1

Introduction and Objectives. Results of array analyses early vs. late Mets early Mets: PFS = 0 - 9 months, median = 1 month, n = 5 late Mets: PFS = 60-156 months, median = 92.5 months, n = 6 306 differentially expressed genes (414 probe sets; Fig.1), 27 ? & 279? in early Mets

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ACP, annealing control primer

Differentially expressed genes involved in spine formation on seed of carrot Sanggyu Park*, InSun Kim 1 , Jong-Sug Park 2 Division of Life & Environmental Science, Daegu Univ., 1 Biology Department, Keimyung University, 2 Plant Metabolite Engineering Team, NIAB.

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USING SALAMANDER IN BIOMONITORING AND CHARACTERIZING DISRUPTED DEVELOPMENT

Effect of thyroid hormone concentration on the transcriptional response underlying induced metamorphosis in the Mexican axolotl ( Ambystoma ). INTRODUCTION.

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