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In silico studies to predict protein protein contacts

In silico studies to predict protein protein contacts. Two approaches: (1) on the macro level: map networks of protein interactions (2) on the micro level: understand mechanisms of interaction to predict interaction sites Growth of genome data has stimulated a lot of research in area (1)

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482 views • 36 slides

Analysis of the RNAseq Genome Annotation Assessment Project

Analysis of the RNAseq Genome Annotation Assessment Project. by Subhajyoti De. ?. ?. ?. The RNAseq Genome Annotation Assessment Project. The RGASP aims to assess the current progress of automatic gene building using RNAseq as its primary dataset.

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378 views • 24 slides

Jed Zaretzki, Charles Bergeron, Tao-wei Huang, Kristin Bennett, and Curt M. Breneman*

Mechanism Legend. Csp3 Hydroxylation O-Dealkylation Csp2 Hydroxylation N-Dealkylation Aromatic Ring N-Oxide Formation Non-Aromatic Ring SII Oxidation Aldehyde Oxidation SIV Oxidation Alcohol Oxidation S with 2 Oxygens Phosphorous.

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170 views • 1 slides

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In silico studies to predict protein protein contacts

Analysis of the RNAseq Genome Annotation Assessment Project

Jed Zaretzki, Charles Bergeron, Tao-wei Huang, Kristin Bennett, and Curt M. Breneman*