'Biological databases' presentation slideshows

Database search and pairwise alignments

1.23k views • 112 slides

Introducing Bioinformatics Databases

Introducing Bioinformatics Databases. Tan Tin Wee/Victor Tong/Susan Moore Dept of Biochemistry NUS Mohammad Asif Khan Perdana University Graduate School of Medicine. Sources of Biological Knowledge. Past: textbooks, monographs, books, journals.

1.47k views • 107 slides

Adriana Maggi DOCENTE DI BIOTECNOLOGIE FARMACOLOGICHE CORSO DI LAUREA SPECIALISTICA IN BIOTECNOLOGIE DEL FARMACO AA 201

Adriana Maggi DOCENTE DI BIOTECNOLOGIE FARMACOLOGICHE CORSO DI LAUREA SPECIALISTICA IN BIOTECNOLOGIE DEL FARMACO AA 2011/2012 Lezione 5 Bioinformatica nel processo di drug discovery. Bioinformatics in the drug discovery process. Alessandro Villa.

768 views • 58 slides

Biological Databases

Biological Databases. By : Lim Yun Ping E mail : yunping@chitre.net National University of Singapore. Overview. Introduction What is a database What type of databases can we access What roles do they play What type of information can we get from them How do we access these information.

1.31k views • 48 slides

Biological Databases

Biological Databases. What types of data are available? What is a database? What are Genbank and Entrez? What does a typical entry look like? How does one use the database?. BIO520 Bioinformatics Jim Lund. NCBI Biological Databases. Central Dogma-o-centric Genomic DNA sequence

736 views • 43 slides

BCB 444/544

BCB 444/544. Finish: Lecture 2- Biological Databases Lecture 4 Sequence Alignment #4_Aug27. Required Reading ( before lecture). Mon Aug 27 - for Lecture #4 Pairwise Sequence Alignment Chp 3 - pp 31-41 Xiong Textbook Wed Aug 29 - for Lecture #5 Dynamic Programming

1.31k views • 38 slides

Finding Functional Gene Relationships Using the Semantic Gene Organizer (SGO)

477 views • 37 slides

Biological databases Function and pathways databases - KEGG

Essential Bioinformatics and Biocomputing ( LSM2104: Section I) Lecture 3: More biological databases, retrieval systems and database searching. Biological databases Function and pathways databases - KEGG. KEGG ( http://www.genome.ad.jp/kegg/kegg2.html ) database links genetic

615 views • 34 slides

Databases for Bioinformatics A very partial introduction

Databases for Bioinformatics A very partial introduction. Paul Greenfield CSIRO Mathematics, Informatics and Statistics January 2013. Databases. A heavily overloaded term

448 views • 31 slides

Spring 2007, CS584: Computational and Life Science

Spring 2007, CS584: Computational and Life Science. Kim Gernert BimCore, School of Medicine James Lu Mathematics and Computer Science. Overview. Computer Science broadly applicable

334 views • 24 slides

Supporting a thriving bioinformatics culture in East Asia

338 views • 23 slides

Corals and sea anemones on line: a functioning biodiversity database

Corals and sea anemones on line: a functioning biodiversity database. D. G. Fautin R. W. Buddemeier. University of Kansas: Department of Ecology and Evolutionary Biology, Natural History Museum, Kansas Geological Survey. National Science Foundation grants OCE 00-03970 (NOPP)

284 views • 19 slides

Introduction of bioinformatics and Biological Database

370 views • 19 slides

Corals and sea anemones on line: a functioning biodiversity database

Corals and sea anemones on line: a functioning biodiversity database. D. G. Fautin R. W. Buddemeier. University of Kansas: Department of Ecology and Evolutionary Biology, Natural History Museum, Kansas Geological Survey. National Science Foundation grants OCE 00-03970 (NOPP)

275 views • 19 slides

Bioinformatics 2, IT and health

Bioinformatics 2, IT and health. Tejal Joshi, Post doc Center for Biological Sequence Analysis, DTU, Building 208. Room 61 tejal [@] cbs [.] dtu [.] dk. Technical University of Denmark - DTU Department of systems biology. Technical University of Denmark - DTU

321 views • 18 slides

Databanks (A)

Databanks (A). NCBI (National Center for Biotechnology Information) is a home for many public biological databases (see an older diagram below). All of the databases are interlinked , and they all have common search and retrieval system - Entrez.

406 views • 12 slides

Types of GCOBs

Types of GCOBs. theoretical challenges challenges in the development of resources. Measure of Progress. Open ended GCOB #4 from Schwenk et al. (2009): Understanding how genomes produce organisms.When are we done? Goal oriented

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Components of a Cell (Eukaryotes)

Components of a Cell (Eukaryotes). ~70% water 4% small molecules 15-20% proteins 2-7% DNA/RNA 4-7% membrane. Picture from on-line biology book, http://www.emc.maricopa.edu/faculty/farabee/BIOBK/BioBookCELL2.html. Biological databases.

397 views • 8 slides

1 & 3. Protection of Privacy requires checking what goes OUT.

Trust and Security in Biological Databases: Security When Collaborating . Gio Wiederhold Depts. of Computer Science, Electr. Eng. and Medicine Stanford University, CA. www-db.stanford.edu/people/gio.html.

161 views • 7 slides

Inbar Plaschkes , M.Sc.

http://bioinfo.bgu.ac.il. From 2003. Vered Caspi, Ph.D. Head, Bioinformatics Core Facility. Michal Gordon, Ph.D. Inbar Plaschkes , M.Sc. Bareket Dassa, Ph.D. Chen Zrubavel , IT manager. Hadas Ner-Gaon , Ph.D. Using NGS technology. Next Generation Sequencing.

185 views • 6 slides