Bioinformatics 01 Part 3: Pairwise Alignments and Database Searches. Similarity and homology Gap penalties and scoring matrices in pairwise alignments Alignment algorithms Database searching: BLAST and FASTA. Similarity and Homology.
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Sequence 2 VLKAHIDGGSRLTS
Sequence 1 VLKAHLIDGGSKLTS
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Sequence 2 VLKAH-IDGGSRLTS
Identity: 86.7%Examples of Simple Pairwise Alignments