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Stephen Aylward, Kitware (Data/Software) (contact) Steve Pieper, Isomics (Data)

2007 Project Half Week. MIDAS. NA-MIC Data Assimilation: Centralize the archival, analysis, and access of NA-MIC tutorial data and select project data. Plan/Expected Challenges/Publication. Team.

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Stephen Aylward, Kitware (Data/Software) (contact) Steve Pieper, Isomics (Data)

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  1. 2007 Project Half Week MIDAS NA-MIC Data Assimilation:Centralize the archival, analysis, and access of NA-MIC tutorial data and select project data. Plan/Expected Challenges/Publication Team Data: Identify tutorial/demonstration data for Slicer 3.0; define data assimilation requirements; provide feedback on MIDAS and its tools; and publish available, related, NA-MIC resources. Stephen Aylward, Kitware (Data/Software) (contact) Steve Pieper, Isomics (Data) Julien Jomier, Kitware (software) Software: Upload data to MIDAS; extend BatchMake for new experimental methods; refine MIDAS and its tools based on feedback; refine validation dashboard look-and-feel, provide template Batchmake scripts; and define script submission process Related NA-MIC Resources: BIRN anonymous ftp, LONI Pipeline, Imagine2 pipeline. Accomplished by end of Programming Week • Initial data to be hosted has been identified and downloaded • EM Segment Module Tutorial Data • MGH Atlas • Killian Pohl’s MR/MR head registration data • Killian Pohl’s CT/CT abdominal registration data • Steve Pieper’s fMRI/MR registration data • Held discussions with BIRN-Grid representative Niel Jones and Steve Pieper. Identified means of launching Grid tasks from within Slicer for parameter space evaluation and batch processing (using BatchMake).

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