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PtoR. pim400. pim373. pim411. peru605. chi551. chi620. chi497. chi489. chi493. chi487. chi580. peru505. peru243. pim114. chmPto. chm115. chm106. parv80. parv94. peru592. peru554. peru236. peru515. peru245. peru238. peru602. peru518. peru603. peru517. peru521. peru239.

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Ptor

PtoR

pim400

pim373

pim411

peru605

chi551

chi620

chi497

chi489

chi493

chi487

chi580

peru505

peru243

pim114

chmPto

chm115

chm106

parv80

parv94

peru592

peru554

peru236

peru515

peru245

peru238

peru602

peru518

peru603

peru517

peru521

peru239

peru246

peru608

peru234

peru594

chi565

chi151

chi502

chi566

peru570

hir46

hir132

hir137

hir540

LhirPtoE

hir183

hir186

S. ochranthum Pto

parv72

parv79

parv90

chm103

chmPth3

chm116

chm112

chm114

Pth3R

peru513

peru555

Pth3S

peru562

peru506

peru345

peru557

100

75

Pto

78

89

94

96

Pth3

96

95

peru512

100

peru561

peru571

peru569

chi490

95

chi123

chi498

chi499

chi121

chi549

chi149

peru559

100

hir538

80

hir139

hir54

LhirPtoF

chi552

chi600

peru563

peru520

100

100

chi124

Pth5

chmPth5

parv99

99

Pth5R

peru519

78

hir536

peru507

99

penn544

penn64

86

penn203

99

penn542

chi122

chi548

hir541

99

hir168

hir134

100

hir47

84

hir58

hir140

91

penn543

penn545

100

100

penn68

Fen

S. ochranthum Fen

LhirPtoB

95

FenS

FenR

LhirPtoD

98

Pth2

Pth2R

100

81

Pth2S

S. ochranthum Pth2

Pth2 Lyco

S. berthaultii berDF1

parv73

chm117

99

chm101

peru508

100

84

parv84

83

hir178

parv85

100

penn63

Pth4

Pth4R

Pth4S

S. tuberosum tbrDI2

100

S. dulcamara

S.sucrense scrDG4

Outgroup

S. berthaultii berDF4

S. tuberosum tbrDI4

95

S. sucrense scrDG1

S. berthaultii berS1

S. berthaultii ber7A

5 changes


Ptor

Supplemental Figure 1.

Phylogeny based on nucleotide sequences of alleles of Pto gene family inferred by maximum parsimony analysis. The major clades were named according to the genes from the Pto locus from L. esculentum and L. pimpinellifolium (GenBank Acc. No. AF220603 and AF220602). These sequences are highlighted in orange. The suffix 'S' corresponds to the sequences from the cultivar 76S of L. esculentum, while 'R' corresponds to those from the cultivar 76R containing the Pto family introgressed from L. pimpinellifolium. Bootstrap frequencies greater than 75% are indicated above the branches. The tree is rooted as in Vleeshouwers (2001).


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