Genetics 210 personalized medicine and genomics
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Genetics 210: Personalized Medicine and Genomics. For: MDs, PhDs and curious students Spring term. Tue 2:15 – 4:05 Thur. 2:15-4:05 Genotyping : $15 copay Gene210.stanford.edu: info and FAQs . Today. Course overview (~30’) Informed consent (~30’) How to get genotyped (~10’)

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Genetics 210: Personalized Medicine and Genomics

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Genetics 210 personalized medicine and genomics

Genetics 210: Personalized Medicine and Genomics

For: MDs, PhDs and curious students

Spring term. Tue 2:15 – 4:05

Thur. 2:15-4:05

Genotyping : $15 copay

Gene210.stanford.edu: info and FAQs


Today

Today

Course overview (~30’)

Informed consent (~30’)

How to get genotyped (~10’)

Questions (~15’)


Course staff

Course Staff

  • Course Organizers:

    • Stuart Kim (Dev. Bio., Genetics)

    • Aaron Gitler (Genetics)

    • Rosalind Chuang (Neurology)

  • TAs:

    • Andrew Roos (Epidemiology)

    • Thomas Roos (Epidemiology)


Genetics 210 personalized medicine and genomics

Published Genome-Wide Associations


Genetics 210 personalized medicine and genomics1

Genetics 210: Personalized Medicine and Genomics

Diabetes

Heart Disease

Cancer

Alzheimer’s, Parkinson’s/Huntington’s


Genetics 210 personalized medicine and genomics

Human Ancestry


Genetics 210 personalized medicine and genomics

Height prediction


Genetics 210 personalized medicine and genomics

How much Neanderthal are you?

George Church,

Harvard Geneticist

Neanderthal


Genetics 210 personalized medicine and genomics

Stuart

All time record


Genetics 210 personalized medicine and genomics

  • Joint Genotyping Task Force

  • 2008-2010

  • Charles Prober DeanHank Greely Law School

  • Russ Altman GeneticsC. Braddock Med School

  • Pat Brown Biochem.Gil Chu Biochem

  • Mike Grecius Neur.Sean David Med. School

  • Carlos Bustamente Gen.Harry Greenberg Dean

  • Ralph Horwitz PsychLouanne Hudgins Epi

  • Anne James Legal CounselJesse Karmazin Med. School

  • Stuart Kim Dev. Bio.Mark KrasnowBiochem

  • Phil Lavori HRPDavid Magnus Cen. BME

  • Kelly Ormond GeneticsAlan Schatzberg Psych.

  • Mike Snyder GeneticsAtul Butte BMI

  • KeyanSalari Med. SchoolMildred Cho Pediatrics


Personal genotyping

Personal Genotyping

Voluntary. You can use a public genome file instead of your own.

Confidential – instructors will not know who opted to be genotyped.

Private – Your own DNA information will not be revealed.

Counseling - genetic counseling via 23andMe and medical/psychological counseling via Dr. Alan Schatzberg (Psychology, Stanford).


Introductory projects

Introductory Projects

Report on specific genetic locus. Published on SNPedia.com

Class room debate on FDA legislation

Unanticipated opportunities that arise as you explore your genome


Advanced projects project final

Advanced Projects = (project + final)

Annotate whole-genome for Stuart Kim or Aaron Gitler (adopted)

Write a grant for Kaiser-Permanente GWAS (n=110,000)

Analyze exome sequence data from ALS patients

Write an algorithm for choosing minimal n number of people to sequence to get all sequence data in a population


Gene210

Gene210

Three Manuscripts

Textbook

Patent

Grant

iPhone App

in the news

Chicago Medicine Magazine (story on page 18)

Salon Web Magazine (9/2013)

Stanford Medicine - DNA testing improves learning (8/13)

San Jose Mercury News (5/2013)

Time (2/2013)

Nature

USA Today

San Francisco Chronicle Recap

San Francisco Chronicle

Genome Technology

Stanford Press Release

Nature Blogs

LA Times Blog

Genome Web

Center for Genetics and Society

Scientific American


Exploring personal genomics available at amazon com

Exploring Personal GenomicsAvailable at Amazon.com


How to get genotyping kits

How to get genotyping kits

Attend this information session.

Make check $15 to Stanford.

Bring check to Kathy Fisher in Beckman B300.

Fill out informed consent form

Bring samples back to Kathy B300

We will ship the group of samples back to company Tuesday 4pm Feb. 4

Results in 6-8 weeks.

Class starts Tuesday April 1, 2012.


Genetics 210 personalized medicine and genomics

https://www.23andme.com/user/claim/


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