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Overview

Overview. Presented at OGF31 Salt Lake City, July 2011 Geoffrey Fox, Gregor von Laszewski, Renato Figueiredo Contact: https:// portal.futuregrid.org /help. Outline (8:30 am – 10:00 am). Overview of FG (30 min) Geoffrey Fox Overview of Existing Services (15 min)

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Overview

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  1. Overview Presented at OGF31 Salt Lake City, July 2011 Geoffrey Fox, Gregor von Laszewski, Renato Figueiredo Contact: https://portal.futuregrid.org/help

  2. Outline (8:30 am – 10:00 am) • Overview of FG(30 min) • Geoffrey Fox • Overview of Existing Services (15 min) • Gregor von Laszewski • Technology Preview (15 min) • Gregor von Laszewski • Appliances on FG (20 min) • Renato Figueiredo • Education (10 min) • Renato Figueiredo

  3. Acknowledgment: People • Many people have worked on FuturGrid and we are not be able to list all them here. • We will attempt to keep a list available on the portal Web site. • Many others have contributed to this tutorial!! • Thanks!! • https://portal.futuregrid.org

  4. Acknowledgement • The FutureGrid project is funded by the National Science Foundation (NSF) and is led by Indiana University with University of Chicago, University of Florida, San Diego Supercomputing Center, Texas Advanced Computing Center, University of Virginia, University of Tennessee, University of Southern California, Dresden, Purdue University, and Grid 5000 as partner sites.

  5. Reuse of slides • If you reuse the slides please indicate that they are copied from this tutorial. Include a link to https://portal.futuregrid.org • We discourage the printing the tutorial material on paper due to two reasons: • We like to minimize the impact on the environment for paper and ink usage • We intend to keep the tutorials up to date on the Web site at https://portal.futuregrid.org

  6. Technology Previews • Some material presented here is not available to the general user community and is potentially still under development. We show however some technology previews in order to provide you with some exciting new features that we are currently working on. Slides referring to the reviews are marked with the following icon: Technology Preview

  7. FutureGridOverview Geoffrey Fox gcf@indiana.edu http://www.infomall.orghttps://portal.futuregrid.org Director, Digital Science Center, Pervasive Technology Institute Associate Dean for Research and Graduate Studies,  School of Informatics and Computing Indiana University Bloomington OGF 31 Salt Lake City July 2011

  8. US Cyberinfrastructure Context • There are a rich set of facilities • Production TeraGrid facilities with distributed and shared memory • Experimental “Track 2D” Awards • FutureGrid: Distributed Systems experiments cf. Grid5000 • Keeneland: Powerful GPU Cluster • Gordon: Large (distributed) Shared memory system with SSD aimed at data analysis/visualization • Open Science Grid aimed at High Throughput computing and strong campus bridging

  9. FutureGrid key Concepts I • FutureGrid is an international testbed modeled on Grid5000 • Supporting international Computer Science and Computational Science research in cloud, grid and parallel computing (HPC) • Industry and Academia • The FutureGrid testbed provides to its users: • A flexible development and testing platform for middleware and application users looking at interoperability, functionality, performance or evaluation • Each use of FutureGrid is an experiment that is reproducible • A rich education and teaching platform for advanced cyberinfrastructure (computer science) classes

  10. FutureGrid modeled on Grid’5000 • Experimental testbed • Configurable, controllable, monitorable • Established in 2003 • 10 sites • 9 in France • Porto Allegre in Brazil • ~5000+ cores http://futuregrid.org

  11. FutureGrid key Concepts II • FutureGrid has a complementary focus to both the Open Science Grid and the other parts of TeraGrid. • FutureGrid is user-customizable, accessed interactively and supports Grid, Cloud and HPC software with and without virtualization. • FutureGrid is an experimental platform where computer science applications can explore many facets of distributed systems • and where domain sciences can explore various deployment scenarios and tuning parameters and in the future possibly migrate to the large-scale national Cyberinfrastructure. • FutureGrid supports InteroperabilityTestbeds – OGF really needed! • Note much of current use Education, Computer Science Systems and Biology/Bioinformatics

  12. FutureGrid key Concepts III • Rather than loading images onto VM’s, FutureGrid supports Cloud, Grid and Parallel computing environments by dynamically provisioning software as needed onto “bare-metal” using Moab/xCAT • Image library for MPI, OpenMP, Hadoop, Dryad, gLite, Unicore, Globus, Xen, ScaleMP (distributed Shared Memory), Nimbus, Eucalyptus, OpenNebula, KVM, Windows ….. • Growth comes from users depositing novel images in library • FutureGrid has ~4000 (will grow to ~5000) distributed cores with a dedicated network and a Spirent XGEM network fault and delay generator Image1 Image2 ImageN … Choose Load Run

  13. Dynamic Provisioning Results Number of nodes Time elapsed between requesting a job and the jobs reported start time on the provisioned node. The numbers here are an average of 2 sets of experiments.

  14. FutureGrid Partners • Indiana University (Architecture, core software, Support) • Purdue University (HTC Hardware) • San Diego Supercomputer Center at University of California San Diego (INCA, Monitoring) • University of Chicago/Argonne National Labs (Nimbus) • University of Florida (ViNE, Education and Outreach) • University of Southern California Information Sciences (Pegasus to manage experiments) • University of Tennessee Knoxville (Benchmarking) • University of Texas at Austin/Texas Advanced Computing Center (Portal) • University of Virginia (OGF, Advisory Board and allocation) • Center for Information Services and GWT-TUD from TechnischeUniverstität Dresden. (VAMPIR) • Red institutions have FutureGrid hardware

  15. FutureGrid: a Grid/Cloud/HPC Testbed NID: Network Impairment Device PrivatePublic FG Network

  16. Bravo 16 nodes 2 cpus per node 4 cores per CPU • Delta  8 nodes 2 cpus per node 6 cores per CPU plus 2 GPU's per node • Bravo 16 nodes, 192GB memory, 12 TB disk per node, Infiniband (Aug 1), 8 cores per node • Delta 8 nodes, 2 Tesla GPU’s, 192GB memory, 12 TB disk per node, Infiniband (waiting vendor evaluation), 12 cores per node

  17. Compute Hardware

  18. Storage Hardware Will add substantially more disk on node and at IU and UF as shared storage

  19. Spirent XGEM Network Impairments Simulator for jitter, errors, delay, etc • Full Bidirectional 10G w/64 byte packets • up to 15 seconds introduced delay (in 16ns increments) • 0-100% introduced packet loss in .0001% increments • Packet manipulation in first 2000 bytes • up to 16k frame size • TCL for scripting, HTML for manual configuration Network Impairment Device

  20. FutureGrid: Online Inca Summary

  21. FutureGrid: Inca Monitoring

  22. 5 Use Types for FutureGrid • ~100 approved projects over last 6 months • Training Education and Outreach • Semester and short events; promising for non research intensive universities • Interoperability test-beds • Grids and Clouds; Standards; Open Grid Forum OGF really needs • Domain Science applications • Life science highlighted • Computer science • Largest current category (> 50%) • Computer Systems Evaluation • TeraGrid (TIS, TAS, XSEDE), OSG, EGI • Clouds are meant to need less support than other models; FutureGrid needs more user support …….

  23. Current Education projects • System Programming and Cloud Computing, Fresno State, Teaches system programming and cloud computing in different computing environments • REU: Cloud Computing, Arkansas, Offers hands-on experience with FutureGrid tools and technologies • Workshop: A Cloud View on Computing, Indiana School of Informatics and Computing (SOIC), Boot camp on MapReduce for faculty and graduate students from underserved ADMI institutions • Topics on Systems: Distributed Systems, Indiana SOIC, Covers core computer science distributed system curricula (for 60 students)

  24. Current Interoperability Projects • SAGA,Louisiana State,Explores use of FutureGrid components for extensive portability and interoperability testing of Simple API for Grid Applications, and scale-up and scale-out experiments

  25. Current Bio Application Projects • Metagenomics Clustering,North Texas,Analyzes metagenomic data from samples collected from patients • Genome Assembly,Indiana SOIC, De novo assembly of genomes and metagenomes from next generation sequencing data

  26. Current Non-Bio Application Projects • Physics: Higgs boson,Virginia,Matrix Element calculations representing production and decay mechanisms for Higgs and background processes • Business Intelligence on MapReduce,Cal State - L.A.,Market basket and customer analysis designed to execute MapReduce on Hadoop platform

  27. Current Computer Science Projects • Data Transfer Throughput,Buffalo, End-to-end optimization of data transfer throughput over wide-area, high-speed networks • Elastic Computing, Colorado, Tools and technologies to create elastic computing environments using IaaS clouds that adjust to changes in demand automatically and transparently • The VIEW Project, Wayne State, Investigates Nimbus and Eucalyptus as cloud platforms for elastic workflow scheduling and resource provisioning

  28. Current Technology Projects • ScaleMP for Gene Assembly,Indiana Pervasive Technology Institute (PTI) and Biology,Investigates distributed shared memory over 16 nodes for SOAPdenovo assembly of Daphnia genomes • XSEDE,Virginia, Uses FutureGrid resources as a testbed for XSEDE software development • Globus Online, Indiana PTI, Chicago,Investigates the feasibility of providing DemoGrid and its Globus services on FutureGridIaaS clouds

  29. Typical FutureGrid Performance Study Linux, Linux on VM, Windows, Azure, Amazon Bioinformatics

  30. OGF 2010 Demo from Rennes SDSC Rennes Grid’5000 firewall Lille UF UC Sophia ViNe provided the necessary inter-cloud connectivity to deploy CloudBLAST across 6 Nimbus sites, with a mix of public and private subnets.

  31. Education & Outreach on FutureGrid • Build up tutorials on supported software • Support development of curricula requiring privileges and systems destruction capabilities that are hard to grant on conventional TeraGrid • Offer suite of appliances (customized VM based images) supporting online laboratories • Supported ~200 students in Virtual Summer School on “Big Data” July 26-30 with set of certified images – first offering of FutureGrid 101 Class; TeraGrid ‘10 “Cloud technologies, data-intensive science and the TG”; CloudCom conference tutorials Nov 30-Dec 3 2010 • Experimental class use fall semester at Indiana, Florida and LSU; follow up core distributed system class Spring at IU • Offering ADMI (HBCU CS depts) Summer School on Clouds and REU program at Elizabeth City State University

  32. Johns Hopkins Notre Dame Iowa Penn State University of Florida Michigan State San Diego Supercomputer Center Univ.Illinois at Chicago Washington University University of Minnesota University of Texas at El Paso University of California at Los Angeles IBM Almaden Research Center 300+ Students learning about Twister & Hadoop MapReduce technologies, supported by FutureGrid. July 26-30, 2010 NCSA Summer School Workshop http://salsahpc.indiana.edu/tutorial Indiana University University of Arkansas

  33. B534 Distributed Systems Class 17 3-4 person projects

  34. FutureGrid Tutorials • Tutorial topic 1: Cloud Provisioning Platforms • Tutorial NM1: Using Nimbus on FutureGrid • Tutorial NM2: Nimbus One-click Cluster Guide • Tutorial GA6: Using the Grid Appliances to run FutureGrid Cloud Clients • Tutorial EU1: Using Eucalyptus on FutureGrid • Tutorial topic 2: Cloud Run-time Platforms • Tutorial HA1: Introduction to Hadoop using the Grid Appliance • Tutorial HA2: Running Hadoop on FG using Eucalyptus (.ppt) • Tutorial HA2: Running Hadoop on Eualyptus • Tutorial topic 3: Educational Virtual Appliances • Tutorial GA1: Introduction to the Grid Appliance • Tutorial GA2: Creating Grid Appliance Clusters • Tutorial GA3: Building an educational appliance from Ubuntu 10.04 • Tutorial GA4: Deploying Grid Appliances using Nimbus • Tutorial GA5: Deploying Grid Appliances using Eucalyptus • Tutorial GA7: Customizing and registering Grid Appliance images using Eucalyptus • Tutorial MP1: MPI Virtual Clusters with the Grid Appliances and MPICH2 • Tutorial topic 4: High Performance Computing • Tutorial VA1: Performance Analysis with Vampir • Tutorial VT1: Instrumentation and tracing with VampirTrace

  35. FutureGrid Viral Growth Model • Users apply for a project • Users improve/develop some software in project • This project leads to new images which are placed in FutureGrid repository • Project report and other web pages document use of new images • Images are used by other users • And so on ad infinitum ……… • Please bring your nifty software up on FutureGrid!!

  36. … next … Overview of the FG Software and Services

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