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Next Generation Sequencing - Visualization -

Next Generation Sequencing - Visualization -. Arif Hossain Kyung Min Su. Content. Visualization Issues NGSView Tablet. Visualization Issues. Huge Data Various Format Rendering and Navigation Extensibility. NGSView. Berkeley DB engine Front end converter XML format

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Next Generation Sequencing - Visualization -

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  1. Next Generation Sequencing - Visualization - Arif Hossain Kyung Min Su

  2. Content Visualization Issues NGSView Tablet

  3. Visualization Issues • Huge Data • Various Format • Rendering and Navigation • Extensibility

  4. NGSView • Berkeley DB engine • Front end converter • XML format • Open and Documented API • http://ngsview.sourceforge.net

  5. NGSView

  6. NGSView

  7. NGSView

  8. Tablet High-performance visualization and data navigation. Display of reads in both packed and stacked formats. Paired end visualization support. File format support for ACE, AFG, MAQ, SOAP2, SAM and BAM. Search and locate reads by name across entire data sets. Support for Windows, Apple Mac OS X, Linux and Solaris, in 32 and 64-bit.

  9. Tablet

  10. Tablet

  11. Tablet

  12. Question? NGSView http://ngsview.sourceforge.net Tablet http://bioinf.scri.ac.uk/tablet

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