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Microbio entry in XD-LAB: The issue. <entry> <act>. <specimen> : the subject of this study (e.g. a sputum). Direct and/or Microscopic examination < organizer classCode =« BATTERY »>. Observation 1. Observation 2. Aerobic culture < organizer classCode =« BATTERY »>.

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Entry act

Microbio entry in XD-LAB: The issue

<entry>

<act>

<specimen> : the subject of this study (e.g. a sputum)

Direct and/or Microscopicexamination<organizerclassCode=« BATTERY »>

Observation 1

Observation 2

Aerobic culture <organizerclassCode=« BATTERY »>

Observation 1 : positive

Obs 2 : 1st microorganism : staph.aur

Obs 3 : 2nd microorganism : bact.fr

Anaerobic culture <organizerclassCode=« BATTERY »>

Observation 1 : positive

Observation 2 :

1st microorganism : staph.aur

Which one is it?

Findings on one isolate<organizerclassCode=« CLUSTER »>

<specimen> : « staph.aur » (the isolate)

Obs : concentration

Antiobiogram<organizerclassCode=« BATTERY »>

Antibiotic 1

Antibiotic 2


Entry act

Microbio entry in XD-LAB: Solution a) with <qualifiers>

<entry>

<act>

<specimen> : the subject of this study (e.g. a sputum)

Direct and/or Microscopicexamination<organizerclassCode=« BATTERY »>

Observation 1

Aerobic culture <organizerclassCode=« BATTERY »>

Obs 1 : positive

Obs 2 : 1st microorganism : staph.aur

Anaerobic culture <organizerclassCode=« BATTERY »>

Obs 1 : positive

Obs2 : microorganism = staph.aur

Findings on isolate<organizerclassCode=« CLUSTER »>

This is the one!

<specimen> : « staph.aur » (the isolate)

<specimenRole classCode="ISLT">

<specimenPlayingEntity classCode="MIC">

<code code="----------" codeSystem="2.16.840.1.113883.6.96"

codeSystemName="SNOMED-CT"

displayName="Staph.aur">

<qualifier>

<name code="-----" codeSystem="2.16.840.1.113883.6.96" 

displayName="culture"/>

<value code="------" codeSystem="2.16.840.1.113883.6.96" 

displayName=" aerobic"/>

</qualifier>

</code>

Obs : concentration

Antiobiogram<organizerclassCode=« BATTERY »>


Entry act

Microbio entry in XD-LAB: Solution b) : structural change (CP)

Microbio entry in XD-LAB: The issue

<entry>

<act>

<specimen> : the subject of this study (e.g. a sputum)

Direct and/or Microscopicexamination<organizerclassCode=« BATTERY »>

Observation 1

Observation 2

Aerobic culture <organizerclassCode=« BATTERY »>

Observation 1 : positive

Obs 2 : 1st microorganism : staph.aur

Obs 3 : 2nd microorganism : bact.fr

Here’s the one !

Findings on one isolate<organizerclassCode=« CLUSTER »>

<specimen> : « staph.aur » (the isolate)

Obs : concentration

Antiobiogram<organizerclassCode=« BATTERY »>

Antibiotic 1

Antibiotic 2

Anaerobic culture <organizerclassCode=« BATTERY »>

Observation 1 : positive

Observation 2 :

1st microorganism : staph.aur

Findings on one isolate<organizerclassCode=« CLUSTER »>


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