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Developed as part of the Australian eResearch Organisations’ User Support Project. Information on GVL - Genomics Virtual Laboratory www.genome.edu.au. Oct 2013 Audience: Service Desk. www.genome.edu.au. What is GVL?.

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Developed as part of the Australian eResearch Organisations’ User Support Project

Information on GVL - Genomics Virtual Laboratory

www.genome.edu.au

Oct 2013

Audience: Service Desk

www.genome.edu.au

what is gvl
What is GVL?
  • The Genomics Virtual Laboratory takes the IT out of Bioinformatics. It lets Biologists use a suite of genomics analysis tools that currently often require specialist assistance.
what is gvl1
What is GVL?
  • Galaxy, adapted to run on the Australian Research Cloud (NeCTAR)
    • A web-based scalable workflow platform for genomic analysis
  • Researcher Resources:
    • Protocols describing bioinformatics analysis techniques, possibly using Galaxy or other genomics bioinformatics tools
    • Tutorials to demonstrate specific uses of Galaxy tools and workflows. This includes tutorial documentation, (possibly new) tools, and Galaxy sample data and histories
    • Tools required for Protocols, Tutorials and general use
  • AScience Collaboration Framework, for sharing documentation and community knowledge bases
  • Integration with significant datasets, on the Australian Research Cloud
  • Visualisation Tools
    • An Australian mirror of the UCSC Genome Browser
    • IGV integrated with Galaxy
gvl support
GVL Support
  • Service Desk: https://genome.edu.au/wiki/Help:Contents
  • Website: http://www.genome.edu.au
  • User Guides: wiki.galaxyproject.org
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