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WP2. Data Management

WP2. Data Management. WP2. Data Management. Structure 4DEMON. WP1 Coordination MUMM-all. WP3 Contamination ILVO-MUMM. WP4 Eutrophication MUMM-Ugent-VLIZ. WP6 Data analysis all. WP2 Data Management MUMM-VLIZ. WP5 Ocean Acidification Ulg-MUMM. K ick-off 4DEMON , RBINS, 13 March 2014.

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WP2. Data Management

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  1. WP2. Data Management

  2. WP2. Data Management Structure 4DEMON WP1 Coordination MUMM-all WP3 Contamination ILVO-MUMM WP4 Eutrophication MUMM-Ugent-VLIZ WP6 Data analysisall WP2 Data Management MUMM-VLIZ WP5 Ocean Acidification Ulg-MUMM Kick-off 4DEMON , RBINS, 13 March 2014

  3. WP2. Data Management Structure 4DEMON WP1 Coordination MUMM-all WP3 Contamination ILVO-MUMM WP4 Eutrophication MUMM-Ugent-VLIZ WP6 Data analysisall WP2 Data Management MUMM-VLIZ WP5 Ocean Acidification Ulg-MUMM Kick-off 4DEMON , RBINS, 13 March 2014

  4. WP2. Data Management Structure 4DEMON Need for: • General archive and data inventory • Data formats and procedures for centralising data • Data integration • Dissemination and data distribution • Organising the general workflow Kick-off 4DEMON , RBINS, 13 March 2014

  5. WP2. Data Management Data Inventory and Tracking System • Issues & Solution: • Complexity of the data • High number of data (40 years), multidisciplinary • Many data originators • Data and metadata in different sources • Identification of data gaps, missing metadata (methodology, sampling gear,…) • Need for well coordinated data inventory and tracking system • helping in: • Priority data import • No duplication of digitization effort • Result WP2: • Compiling integrated inventory assembled in WP3-5 Kick-off 4DEMON , RBINS, 13 March 2014

  6. WP2. Data Management Data Inventory and Tracking System DITS: Tool for inventory of (historic) files, uploading files and definition of data sets with import status (follow-up) & online interface. Online inventory QC IDOD, … DATA FILES DATA SETS WHAT Inventory available data Tracking data Upload original files View results Check completeness Import status Import WHO RBINS (REMSEM/BMDC), ILVO, UGent, VLIZ, ULg RBINS (BMDC), VLIZ RBINS (BMDC) Kick-off 4DEMON , RBINS, 13 March 2014

  7. WP2. Data Management Dataflow File Report Publication Other database Sources Describe & upload MDA DITS Public archive Inventory & archive DITS Combine & track Dataset tracking Integrate & track WP4 biodiversity: bioformat WPX: CL format Import IMERS IDOD MDA Data file Products Public Internal other IMIS Portal

  8. WP2. Data Management 1. Data Inventory & Public Archive File Report Publication Other database Sources Describe & upload MDA DITS Public archive Inventory & archive DITS Combine & track Dataset tracking Integrate & track WP4 biodiversity: bioformat WPX: CL format Import IMERS IDOD MDA Data file Products Public Internal other IMIS Portal

  9. WP2. Data Management 1. Data Inventory & Public Archive Data inventory and tracking system (DITS) Objectives: • Common inventory of data • Describe different data sources • Upload and archive the data files • Track import status of files Marine Data Archive (MDA) Objectives: • Extra backup of data files and sources Kick-off 4DEMON , RBINS, 13 March 2014

  10. WP2. Data Management 1. Data Inventory & Public Archive

  11. WP2. Data Management 1. Data Inventory & Public Archive Data inventory and tracking system (DITS) Objectives: • Common inventory of data • Describe different data sources • Upload and archive the data files • Track import status of files Marine Data Archive (MDA) Objectives: • Extra backup of data files and sources Kick-off 4DEMON , RBINS, 13 March 2014

  12. WP2. Data Management 1. Data Inventory & Public Archive Kick-off 4DEMON , RBINS, 13 March 2014

  13. WP2. Data Management 2. Reporting formats File Report Publication Other database Sources Describe & upload MDA DITS Public archive Inventory & archive DITS Combine & track Dataset tracking Integrate & track WP4 biodiversity: bioformat WPX: CL format Import IMERS IDOD Data file Products Public Internal other IMIS Portal

  14. WP2. Data Management 2. Reporting format CL format IDOD • Common Layout format (BMDC) • Bioformat (VLIZ, biodiversity WP4) Kick-off 4DEMON , RBINS, 13 March 2014

  15. WP2. Data Management 2. Reporting format CL format IDOD PER DATA TYPE: • Sediment • Water • Biota • Biodiversity • Air Kick-off 4DEMON , RBINS, 13 March 2014

  16. WP2. Data Management 2. Reporting format CL format IDOD Data on whole organism Contaminant on given tissue Kick-off 4DEMON , RBINS, 13 March 2014

  17. WP2. Data Management 2. Reporting format CL format IDOD Kick-off 4DEMON , RBINS, 13 March 2014

  18. WP2. Data Management 2. Reporting format Bioformat IMERS • A specific standard data format based on • Darwin Core and the OBIS scheme Sheet 1: METADATA INFO DITS IMIS

  19. WP2. Data Management 2. Reporting format Bioformat IMERS DOCUMENT – INVENTORY STEP  BIOFORMAT • Surveyinformation • Biological data • Physico-chemical data Sheet 2: DATA IMERS Eurobis, LifeWatch,... IDOD

  20. WP2. Data Management 3. Data integration File Report Publication Other database Sources Describe & upload MDA DITS Public archive Inventory & archive DITS Combine & track Dataset tracking Integrate & track WP4 biodiversity: bioformat WPX: CL format Import IMERS IDOD Data file Products Public Internal other IMIS Portal

  21. WP2. Data Management 3. Data integration • Import in IDOD • Import of biodiversity data via IMERS to IDODand international databases such as EurOBIS and LifeWatch,... Kick-off 4DEMON , RBINS, 13 March 2014

  22. 3. Data integration Kick-off 4DEMON , RBINS, 13 March 2014

  23. 3. Data integration Kick-off 4DEMON , RBINS, 13 March 2014

  24. WP2. Data Management 4. Website & data dissemination File Report Publication Other database Sources Describe & upload MDA DITS Public archive Inventory & archive DITS Combine & track Dataset tracking Integrate & track WP4 biodiversity: bioformat WPX: CL format Import IMERS IDOD Data file Products Public Internal other IMIS Portal

  25. WP2. Data Management 4. Website & data dissemination http://www.4demon.be • Project information • Data systems • Secured pages • Link to IDOD database • Link to Marine Data Archive • Link to document management system • Data portal • 4DEMON data products • Download public data • Dataset inventory Kick-off 4DEMON , RBINS, 13 March 2014

  26. WP2. Data Management 4. Website & data dissemination http://www.4demon.be • International data dissemination • international databases such as • EurOBIS & LifeWatch • Seadatanet & EMODNET • Publication of data sets • Earth System Science Data • Biodiversity Data Journal Kick-off 4DEMON , RBINS, 13 March 2014

  27. WP2. Data Management 4. Website & data dissemination http://www.4demon.be Kick-off 4DEMON , RBINS, 13 March 2014

  28. WP2. Data Management 4. Website & data dissemination http://www.4demon.be Home Introduction Background Objectives Kick-off 4DEMON , RBINS, 13 March 2014

  29. WP2. Data Management 4. Website & data dissemination http://www.4demon.be Data Systems Inventory Tool Online Catalogue Archive Kick-off 4DEMON , RBINS, 13 March 2014

  30. WP2. Data Management 4. Website & data dissemination http://www.4demon.be Activities Kick-off 4DEMON , RBINS, 13 March 2014

  31. WP2. Data Management 4. Website & data dissemination http://www.4demon.be Data Portal Download Data Products Kick-off 4DEMON , RBINS, 13 March 2014

  32. WP2. Data Management 4. Website & data dissemination http://www.4demon.be Partners Kick-off 4DEMON , RBINS, 13 March 2014

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