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Stein Lab. In-House Symposium 2002. Lincoln Sends His Regrets. Ardavan Kanani. Fiona Cunningham. Gudmundur Thorisson. International HapMap Project. Find regions of linkage disequilibrium in human population. Reduce cost of genetic association studies.

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Stein lab

Stein Lab

In-House Symposium 2002



International hapmap project

Ardavan

Kanani

Fiona

Cunningham

Gudmundur

Thorisson

International HapMap Project

  • Find regions of linkage disequilibrium in human population.

  • Reduce cost of genetic association studies.

  • Understand human population history.


Wormbase

Jack Chen

Todd Harris

WormBase

  • Community database for C. elegans

    • C. elegans genome

    • C. briggsae genome

    • Genetic maps

    • Developmental anatomy

    • RNAi screens

    • Microarray screens

    • Evolutionary biology


Genome knowledgebase

Gopal

Gopinathrao

Guanming

Wu

Geeta

Joshi-Tope

Peter

D’Eustachio

Marc

Gillespie

Lisa

Matthews

Genome KnowledgeBase

  • Biological pathways in human

  • Curated by experts in the field

  • Designed for

    • Education

    • Data mining & discovery

  • Open data/Open software


Generic model organism db

Scott Cain

Ken Clark

Shuly Avraham

Generic Model Organism Db

  • Reusable software for building model organism databases

  • Used by WormBase, FlyBase, Gramene, RatDB, SGD, MGD…

  • Genome browsers, genetic maps, curation tools…

Scott Cain

Shulamit

Avraham


Gramene

Comparative genomics among monocots

Rice as model system

Rice genome, maps, proteins, mutants, QTLs, phenotypes

Map alignments to maize, wheat, oats, barley &c.

Doreen Ware

Steve Schmidt

Chris Mahr

Liya Ren

Kiran Kumar

Wei Zhao

Gramene

Chris Mahr


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