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T I N T. University of Minnesota Supercomputing Institute. Introduction. TINT is the Minnesota Supercomputing Institute’s ( MSI’s ) push into c aGrid software development . It encompasses four separate though complimentary projects. Introduction. University Of Minnesota. TROPIX.

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T i n t

TINT

University of Minnesota

Supercomputing Institute


T i n t

Introduction

TINT is the Minnesota Supercomputing Institute’s (MSI’s) pushinto caGrid software development. It encompasses four separate though complimentary projects.

Introduction

University Of Minnesota

TROPIX

TROPIX

Data Sharing and Laboratory Services

ProTIP

GeneTIP

ProTIP

Proteomics Data Analysis

TINT Portal

GeneTIP

Genomics Data Analysis

Conclusion

TINT Portal

MSI Web Frontend

Minnesota Supercomputing Institute


T i n t

Introduction

Currently, all services are deployed on a private federated grid setup between the University of Minnesota and the Mayo Clinic utilizing many of the core caGrid services.

Introduction

University Of Minnesota

UMN/Mayo Private Grid

Mayo Clinic

TROPIX

Mayo GUI

MSI TROPIX Services

ProTIP

GeneTIP

ProTIP Services

Federated Core CaGrid Services

Internal Mayo Services

TINT Portal

GeneTIP Services

Conclusion

TINT Portal

Mayo TROPIX Services

Minnesota Supercomputing Institute


T i n t

TROPIX

TROPIX is a joint project between MSI and the Mayo Clinic to provide caGrid services to search for and share data and advertise and request laboratory services.

Introduction

TROPIX

TROPIX Services (MSI Perspective)

ProTIP

Data Search Service

Lab Request Service

Lab Services Search Service

User Directory Service

GeneTIP

TINT Portal

Conclusion

TINT Portal

Catalog Software

TINT Storage Service

Minnesota Supercomputing Institute


T i n t

ProTIP

ProTIP is MSI’s project to create analytical services for proteomics research. caGrid’s use of Globus is allowing us to put these services on our supercomputers.

Introduction

ProTIP Services

Protein Search Services

TROPIX

Scaffold Service

ProTIP

ReAdW Data Conversion Service

SEQUEST

GeneTIP

X! Tandem

Future Quantification Service

TINT Portal

OMSSA

Conclusion

TINT Portal

TINT Storage Service

GRAM Service (In Progress)

MSI Supercomputers

Minnesota Supercomputing Institute


T i n t

ProTIP

GeneTIP is a new MSI project to build Genomics related caGrid services. Much of the underlying infrastructure is already in place through the development of ProTIP.

Introduction

GeneTIP Services

Potential Analytical Services

TROPIX

Potential Data Conversion

Service(s)

ProTIP

Other Potential Genomics Services

Blast

GeneTIP

Birdseed

TINT Portal

Potential Data Qualification Service(s)

Other

Conclusion

TINT Portal

TINT Storage Service

GRAM Service (In Progress)

MSI Supercomputers

Minnesota Supercomputing Institute


T i n t

TINT Portal

The TINT Portal is MSI’s end-user interface that ties all of these services together. Users are using it to share data and do actual research using ProTIPcaGrid services.

Introduction

TROPIX

ProTIP

GeneTIP

TINT Portal

Conclusion

Minnesota Supercomputing Institute


T i n t

Conclusion

MSI makes extensive use of caGrid software to facilitate cutting edge research. Several improvements to caGrid would improve our development process.

Introduction

  • Greater Automation! Ease automation of service development, customization, and deployment using Ant tasks and runtime configuration files.

  • Improve Scalability! Work with the Globus folks to migrate to an Axis stack that can more efficiently serialize large amounts of data.

  • Establish the Federation! Bring other institutions in as members of the public grid trust fabric.

  • Ease the Process! Make it easier to get silver/gold level compliance.

TROPIX

ProTIP

GeneTIP

TINT Portal

Conclusion

Minnesota Supercomputing Institute


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