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Additional File 7 K-means cluster graphs (15 clusters)

Additional File 7 K-means cluster graphs (15 clusters). Middle G1. Early G1. Late G1. Early S. Late S. G1/S. G2. M. Middle G1. Early G1. Late G1. Early S. Late S. G1/S. G2. M. Middle G1. Early G1. Late G1. Early S. Late S. G1/S. G2. M.

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Additional File 7 K-means cluster graphs (15 clusters)

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  1. Additional File 7 K-means cluster graphs (15 clusters)

  2. Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

  3. Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

  4. Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

  5. Increased expression of genes including: BAX, BAX inhibitor 1, TRAIL receptor 2, CD9, EGFR, syndecan 4, signaling mediators, & genes involved in transcriptional regulation Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

  6. Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

  7. Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

  8. Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

  9. This set mostly includes ribosomal subunit genes as well as genes encoding beta-actin, beta-5-tubulin, and myosin light polypeptide Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

  10. Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

  11. Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M Increased expression of genes including those encoding cathepsins L, L2, and Z, PPGB, EGFR, lamin B, poliovirus, leptin, MHC molecules, and solute/ion carrier transporters

  12. Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

  13. Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

  14. Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

  15. Middle G1 Early G1 Late G1 Early S G1/S Late S G2 M

  16. Middle G1 Early G1 Late G1 Early S Late S G1/S G2 M

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