Common sample 2013 viktor ko ich petr chrastina dptc czech republic
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Common sample 2013 Viktor Kožich Petr Chrastina DPTC Czech Republic. Sample referral information. 4 years old boy splenomegaly (known since 6 months of life) failure to thrive special eating behavior spontaneously rejecting protein

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Common sample 2013 Viktor Kožich Petr Chrastina DPTC Czech Republic

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Common sample 2013 viktor ko ich petr chrastina dptc czech republic

Common sample 2013Viktor KožichPetr ChrastinaDPTC Czech Republic


Sample referral information

Sample referral information

4 years old boy

  • splenomegaly (known since 6 months of life)

  • failure to thrive

  • special eating behavior

    • spontaneously rejecting protein

      Sample was collected at the age of 17 years during a routine checkup while receiving specific treatment


Sample referral information1

Sample referral information

Diagnosis: Lysinuric protein intolerance

This sample was contributed by Dr. Jeannette Klein from Charité-Campus Virchow – Klinikum in Berlin.

The patient is followed by Dr. Julia Hennermann.


Diagnosis confirmation

Diagnosis confirmation

Mutation analysis of SLC7A7 gene

  • homozygosity for a 2-bp deletion c.253_254delTT in exon 3

  • This mutation has been described before in the literature and results in a frameshift and a premature translation termination codon.

  • Mutation analysis has been performed by Drs. Uusitalo and Laitinen in Turku. Finland.


Common sample 2013 viktor ko ich petr chrastina dptc czech republic

Model for the absorption/reabsorption of amino acidsin an intestinal/proximal tubule epithelial cell

LPI

Palacín M. Bertran J. Chillarón J. Estévez R. Zorzano A.: MGM 81. 2004


Common sample 2013 viktor ko ich petr chrastina dptc czech republic

Dysfunction of the urea cycle in LPI

Palacín M. Bertran J. Chillarón J. Estévez R. Zorzano A.: MGM 81. 2004


Dpt centers

DPT Centers

  • Czech Republic20 labs (3 no answer)

  • France23 labs (1 no answer)

  • Netherlands19 labs (1 no answer)

  • Switzerland19 labs

  • United Kingdom22 labs (2 no answer)


Creatinine in urine

Creatinine in urine


Orotic acid in urine

Orotic acid in urine


Orotic acid in urine1

Orotic acid in urine

300

200

mmol/mol creatinine

100

0.0

CZ

NL

UK

F

CH

IQR and adjacent values, outliers


Amino acids in urine

Amino acids in urine


Common sample 2013 viktor ko ich petr chrastina dptc czech republic

Amino acids profile (IEC-NHD) in urine

lysine

arginine

cystine

ornithine


Lysine in urine

Lysine in urine

1000

mmol/mol creatinine

500

0

CZ

NL

UK

F

CH


Analytical performance

Analytical performance

1 point

Amino acids

Dibasic hyperaminoaciduria

Organic acids/Purines/Pyrimidines

Increased excretion of orotic acid

1 point


Analytical performance1

Analytical performance


Interpretation and recommendation

Interpretation and recommendation

  • Scientific Advisory Board agreed in November 2012 that from 2013 the qualitative schemes will all adopt the same scoring system as other genetics disciplines

  • Two points will be given for interpretation including recommendation

  • Concept of „critical error“ will be introduced later

  • Harmonization of this new approach among the DPT schemes is ongoing process


Interpretation

Interpretation


Recommendations

Recommendations


Recommendations1

Recommendations


Interpretative proficiency

Interpretative proficiency


Total scoring

Total scoring


Summary

Summary

  • Typical DPT sample with good proficiency scores

  • 10/95 participants did not detect elevated orotic acid

  • The DPT Centers are working towards harmonization of scoring interpretative proficiency that includes recommendations


Viktor k ozich @lf1 cuni cz petr chrastina@vfn cz

[email protected]@vfn.cz


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