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Teaching molecular structure using Jmol

Teaching molecular structure using Jmol. Robert M. Hanson Department of Chemistry, St. Olaf College Northfield, MN 55057 August 19, 2009 238th ACS National Meeting Washington, DC. The Jmol Project. Jmol molecular visualization project Open-source Jmol.sourceforge.net

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Teaching molecular structure using Jmol

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  1. Teaching molecular structure using Jmol Robert M. Hanson Department of Chemistry, St. Olaf College Northfield, MN 55057 August 19, 2009 238th ACS National Meeting Washington, DC

  2. The Jmol Project • Jmol molecular visualization project • Open-source • Jmol.sourceforge.net • Active user/developer community about 400 “users” about 150 “developers” collectively 23,000 list messages

  3. The Jmol Community • Professional graphics designers • Professional developers • Professors, graduate students, undergraduates

  4. The Jmol Community • Generally one of three focal points: • Research • Publishing • Education

  5. The Jmol Community • Generally one of three focal points: • Research • Computational chemistry visualization • Structural biology • Electron microscopy/X-ray crystallography • Publishing • Education

  6. JR Schmidt, U. Wisconsin “WebMO” http://www.webmo.net/

  7. Peter Rose, RCSB http://www.rcsb.org/pdb/explore/jmol.do?structureId=1LDN

  8. Peter Rose, RCSB http://www.rcsb.org/pdb/explore/jmol.do?structureId=1LDN

  9. Patrick Carroll, U. Penn. http://macxray.chem.upenn.edu/

  10. The Jmol Community • Generally one of three focal points: • Research • Publishing • Interactive website content • Professional graphics design • Database front ends • Education

  11. Frieda Reichsman, http://pubs.acs.org/doi/media/10.1021/cb600303y/figure2.htm

  12. Tim Driscoll MolVis http://molvis.sdsc.edu/fgij/fg.htm?mol=1ldn

  13. Alan Hewat, http://icsd.fiz-karlsruhe.de/icsd/

  14. Alan Hewat, http://icsd.fiz-karlsruhe.de/icsd/

  15. The Jmol Community • Generally one of three focal points: • Research • Publishing • Education • High School • General chemistry • Organic chemistry • Biochemistry • Inorganic chemistry • Computational chemistry

  16. The Molecular Workbench

  17. The Molecular Workbench Charles Xie, Concord Consortium http://mw.concord.org/modeler/

  18. Molecular Symmetry Dean Johnston, Otterbein College, http://symmetry.otterbein.edu/

  19. Bob Hanson, http://www.stolaf.edu/depts/chemistry/mo/struc/explore.htm

  20. Bob Hanson, http://www.stolaf.edu/depts/chemistry/mo/struc/explore.htm

  21. Bob Hanson, http://www.stolaf.edu/depts/chemistry/mo/struc/explore.htm

  22. Bob Hanson, http://www.stolaf.edu/depts/chemistry/mo/struc/explore.htm

  23. CoolMolecules Mike McGuan Melanie Casavant Bob Hanson, http://www.stolaf.edu/depts/chemistry/mo/struc/explore.htm

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