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Bioinformatics & GCAT-SEEK Vince Buonaccorsi Juniata College

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Bioinformatics & GCAT-SEEK Vince Buonaccorsi Juniata College. Goal: Facilitate massively parallel sequencing projects involving faculty teaching undergrads in their area of interest Listserv F aculty development workshops Group discounts with sequencing facilities

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bioinformatics gcat seek vince buonaccorsi juniata college
Bioinformatics & GCAT-SEEK Vince BuonaccorsiJuniata College
  • Goal: Facilitate massively parallel sequencing projects involving faculty teaching undergrads in their area of interest
    • Listserv
    • Faculty development workshops
    • Group discounts with sequencing facilities
    • Pooled runs outside workshop
    • Write labs and data, web posting
    • Increase access to computational resources
bioinformatic approaches euk genomics
Bioinformatic Approaches: Euk Genomics
  • Genome Assembly: Unix - Quake, SOAPdenovo2
  • Genome Annotation: Unix - Maker
  • Genome Comparison: Web - CoGe, InParanoid
  • RADseq: Unix - Stacks, R
juniata hhmi certificate in genomics ethics and society
Juniata/HHMI Certificate in Genomics, Ethics and Society
  • Four required core courses
    • Genomics, ethics and society
    • Basic molecular biology, genetics, and genomics
    • Statistics
    • Informatics (traditional CSor CURE-style classes)
  • Any three elective courses related to ELSI genomic themes from:
    • Science and Human Values
    • Judgment & Decision Making
    • Medicine, Doctors, and Russian Literature
    • Leadership in the 21rst Century/Executive leadership
    • Social History of Medicine
    • Medieval Medicine
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