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The EBI Enzyme Portal. Cheminformatics and Metabolism Team. MACiE. InterPro. Enzyme-related resources at the EBI. MACiE. InterPro. The Enzyme Portal integrates EBI ’ s enzyme resources into a single access point. Enzyme Portal. Stakeholders' Requirements.

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Presentation Transcript
The ebi enzyme portal

The EBI Enzyme Portal

Cheminformatics and Metabolism Team


Enzyme related resources at the ebi

MACiE

InterPro

Enzyme-related resources at the EBI


The enzyme portal integrates ebi s enzyme resources into a single access point

MACiE

InterPro

The Enzyme Portal integrates EBI’s enzyme resources into a single access point

Enzyme Portal


Stakeholders requirements
Stakeholders' Requirements

  • Data source to be acknowledged

  • Free and open access to the data

  • Scope: Enzyme related resources


User requirements gathering
User Requirements Gathering

  • Target users

  • User roles

  • User interviews

  • User workflow analysis

  • User workshop

    • Users' expectation on the content

    • Users' desired functionalities

  • High level user requirements captured


User requirements functionalities
User Requirements - Functionalities

Compare enzymes

Customised export

  • Search

    • Free text

    • Chemical structure

    • Sequence

  • Browse

    • EC Hierarchy

    • Chemical structure

    • Disease

    • Taxonomy


User requirements content
User Requirements - Content

  • Enzyme Headline

  • Pathway

  • Reaction

  • Structure-Function

  • Diseases and Drugs

  • References


Enzyme portal home page
Enzyme Portal home page












Work in progress

  • Search by sequence or chemical structure

  • Browsing

  • Enzyme comparison

  • Customised downloads


Acknowledgements
Acknowledgements

Jenny Cham

Rafael Alcántara

Joseph Onwubiko

Christoph Steinbeck

Paula de Matos

http://www.ebi.ac.uk/enzymeportal

  • Data providers

  • Testers

  • User Experience Analysts

  • Everyone who has contributed to the Enzyme Portal

  • You


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